RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CSNK2BP67870 215 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 PSG6Q00889 435 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF267Q14586 743 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 GPR68Q15743 365 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 PERM1Q5SV97 790 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 RBM44Q6ZP01 1051 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 OR4D9Q8NGE8 314 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CNIH3Q8TBE1 160 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 VSTM2LQ96N03 204 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 UCK2Q9BZX2 261 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF304Q9HCX3 659 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 FGF21Q9NSA1 209 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 NDOR1Q9UHB4 597 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 GXYLT2A0PJZ3 443 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 AP3D1O14617 1153 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 HYAL3O43820 417 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 KCNK2O95069 426 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 OSMP13725 252 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 NID1P14543 1247 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 POU2F1P14859 743 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 JUNBP17275 347 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 SSTR4P31391 388 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 OR1D4P47884 311 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 CRISP1P54107 249 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 UGT2B15P54855 530 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 RGS8P57771 180 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 TEKQ02763 1124 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 COX10Q12887 443 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 ILKQ13418 452 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 PGBD2Q6P3X8 592 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF836Q6ZNA1 936 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 ARHGAP22Q7Z5H3 698 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 B3GNT8Q7Z7M8 397 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 ENTHD1Q8IYW4 607 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 DEPDC4Q8N2C3 294 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 EID2Q8N6I1 236 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 OR7G1Q8NGA0 311 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 DIO2Q92813 273 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 FBXO34Q9NWN3 711 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 DHCR7Q9UBM7 475 aaKnown RBP13.66□□□□□ -0.22
VPS33B-205ENST00000556096 REV1Q9UBZ9 1251 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 TPRKBQ9Y3C4 175 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 NINQ8N4C6 2090 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 ASXL3Q9C0F0 2248 aa13.66□□□□□ -0.22
VPS33B-205ENST00000556096 RP1P56715 2156 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 A0A1B0GX78 115 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 A0A1W2PQM1 296 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 OR2W5A6NFC9 320 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ZAR1LA6NP61 321 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 HRKO00198 91 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 CDX4O14627 284 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-205ENST00000556096 CYP7B1O75881 506 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 IFNA16P05015 189 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 FBLP22087 321 aaKnown RBP13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TTKP33981 857 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TRHRP34981 398 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TAS2R41P59536 307 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 CCL7P80098 99 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ACY1Q03154 408 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ST3GAL3Q11203 375 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TRAM2Q15035 370 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 MAPK14Q16539 360 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 CNPY1Q3B7I2 92 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ZBED5Q49AG3 693 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 FIGNL1Q6PIW4 674 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 KCTD8Q6ZWB6 473 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TMPRSS9Q7Z410 1059 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF615Q8N8J6 731 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 BPIFB6Q8NFQ5 453 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TOR1AIP2Q8NFQ8 470 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 SLC38A4Q969I6 547 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 PTCHD1Q96NR3 888 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 TUBA1CQ9BQE3 449 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 OR10A5Q9H207 317 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 LRRN3Q9H3W5 708 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ARMC7Q9H6L4 198 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 SCN3BQ9NY72 215 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ATXN7L1Q9ULK2 861 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-205ENST00000556096 SRPK3Q9UPE1 567 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 RNF6Q9Y252 685 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 SPTBP11277 2137 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF292O60281 2723 aa13.65□□□□□ -0.22
VPS33B-205ENST00000556096 IGKV3D-11A0A0A0MRZ8 115 aa13.64□□□□□ -0.23
VPS33B-205ENST00000556096 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-205ENST00000556096 C4orf47A7E2U8 309 aa13.64□□□□□ -0.23
VPS33B-205ENST00000556096 FRS3O43559 492 aa13.64□□□□□ -0.23
VPS33B-205ENST00000556096 MRPS14O60783 128 aaKnown RBP13.64□□□□□ -0.23
VPS33B-205ENST00000556096 OR5F1O95221 314 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms