RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NXF3Q9H4D5 531 aaKnown RBP1.96□□□□□ -2.1
SNX6-204ENST00000555541 FAM124BQ9H5Z6 455 aaPredicted RBP1.96□□□□□ -2.1
SNX6-204ENST00000555541 APMAPQ9HDC9 416 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 DUSP12Q9UNI6 340 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 SNX5Q9Y5X3 404 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 CACNG2Q9Y698 323 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 METP08581 1390 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 PARD3Q8TEW0 1356 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 IGHV7-81A0A0B4J1V7 117 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 TRAF3IP2O43734 574 aaPredicted RBP1.95□□□□□ -2.1
SNX6-204ENST00000555541 NME2P1O60361 137 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 SCRG1O75711 98 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 ANP32DO95626 131 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 CD55P08174 381 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 TMOD1P28289 359 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 CDH5P33151 784 aaPredicted RBP1.95□□□□□ -2.1
SNX6-204ENST00000555541 RPS10P46783 165 aaKnown RBP1.95□□□□□ -2.1
SNX6-204ENST00000555541 PITPNBP48739 271 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 CCL11P51671 97 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 NME5P56597 212 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 RCN2Q14257 317 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 LRRC36Q1X8D7 754 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 ACSF3Q4G176 576 aaPredicted RBP1.95□□□□□ -2.1
SNX6-204ENST00000555541 PNCKQ6P2M8 343 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 TMEM270Q6UE05 265 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 AMZ2Q86W34 360 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 GDAP1Q8TB36 358 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 TMEM45BQ96B21 275 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 TMEM80Q96HE8 168 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 CHRDL1Q9BU40 450 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 FUT8Q9BYC5 575 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 IL1RAPL2Q9NP60 686 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 CD274Q9NZQ7 290 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 SPRR3Q9UBC9 169 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 PSG11Q9UQ72 335 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 EXOSC1Q9Y3B2 195 aaKnown RBP1.95□□□□□ -2.1
SNX6-204ENST00000555541 FKBP7Q9Y680 259 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 PLEKHG1Q9ULL1 1385 aa1.95□□□□□ -2.1
SNX6-204ENST00000555541 GAKO14976 1311 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 TRBV6-6A0A0A6YYG2 114 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 LRRD1A4D1F6 860 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 TUBAL3A6NHL2 446 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 H3BMH7 237 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 TM9SF1O15321 606 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 SLC7A4O43246 635 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 IGLL1P15814 213 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CD1BP29016 333 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CTRLP40313 264 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 PMELP40967 661 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 EIF4EBP1Q13541 118 aaPredicted RBP1.94□□□□□ -2.1
SNX6-204ENST00000555541 AANATQ16613 207 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CMPK2Q5EBM0 449 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 HECTD3Q5T447 861 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 LEG1Q6P5S2 330 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 GPBP1Q86WP2 473 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 C17orf82Q86X59 251 aaPredicted RBP1.94□□□□□ -2.1
SNX6-204ENST00000555541 SERPINA12Q8IW75 414 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CCDC36Q8IYA8 594 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 PEX5LQ8IYB4 626 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CENPSQ8N2Z9 138 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 SUMF2Q8NBJ7 301 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 LPCAT1Q8NF37 534 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 OR2A12Q8NGT7 310 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 NEIL3Q8TAT5 605 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 CCDC51Q96ER9 411 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 MMP26Q9NRE1 261 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 DUS2Q9NX74 493 aaKnown RBP1.94□□□□□ -2.1
SNX6-204ENST00000555541 OR1A1Q9P1Q5 309 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 ZNF223Q9UK11 482 aaPredicted RBP1.94□□□□□ -2.1
SNX6-204ENST00000555541 FZR1Q9UM11 496 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 SCML2Q9UQR0 700 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 SLCO1B1Q9Y6L6 691 aa1.94□□□□□ -2.1
SNX6-204ENST00000555541 ZMYM6O95789 1325 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 A0A0J9YXY3 114 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 IGHV3-48P01763 117 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 CHRNA1P02708 482 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 AREGP15514 252 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 VDAC1P21796 283 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 HTR1EP28566 365 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 MARCKSP29966 332 aaPredicted RBP1.93□□□□□ -2.1
SNX6-204ENST00000555541 UGT1A5P35504 534 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 NUDT1P36639 197 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 STARP49675 285 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 KIAA1024LP59773 190 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 DPYSL3Q14195 570 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 TEX44Q53QW1 395 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 FAM133BQ5BKY9 247 aaKnown RBP1.93□□□□□ -2.1
SNX6-204ENST00000555541 PRAMEF7Q5VXH5 474 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 STAC2Q6ZMT1 411 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 YRDCQ86U90 279 aaKnown RBP1.93□□□□□ -2.1
SNX6-204ENST00000555541 C20orf203Q8NBC4 194 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 BLOC1S5Q8TDH9 187 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 RDH5Q92781 318 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 C5orf30Q96GV9 206 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 TXN2Q99757 166 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 ABCG4Q9H172 646 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 VCXQ9H320 206 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 NECAP2Q9NVZ3 263 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 COPS7AQ9UBW8 275 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 SMC3Q9UQE7 1217 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms