RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LIPAP38571 399 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 RPS19P39019 145 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GRK6P43250 576 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 VLDLRP98155 873 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HMGCS1Q01581 520 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 IL1RL1Q01638 556 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PIGFQ07326 219 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 BCL2L1Q07817 233 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ACSM2AQ08AH3 577 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 FAPQ12884 760 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GPR50Q13585 617 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PTPRCAPQ14761 206 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NCF4Q15080 339 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GAGE13Q4V321 117 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 CRB2Q5IJ48 1285 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TOR2AQ5JU69 321 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 COLEC12Q5KU26 742 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 SLC25A30Q5SVS4 291 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HECTD3Q5T447 861 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GCNT6Q5T4J0 391 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 CPTPQ5TA50 214 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HACD4Q5VWC8 232 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ACSM2BQ68CK6 577 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PLAG1Q6DJT9 500 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NADSYN1Q6IA69 706 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GRHL2Q6ISB3 625 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 MZT2BQ6NZ67 158 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TMPRSS11AQ6ZMR5 421 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TPGS1Q6ZTW0 290 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF767PQ75MW2 155 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NANOGNBQ7Z5D8 188 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GALNT5Q7Z7M9 940 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TMPRSS12Q86WS5 348 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PTOV1Q86YD1 416 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PLCZ1Q86YW0 608 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 BBS7Q8IWZ6 715 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TCTE3Q8IZS6 198 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HS3ST5Q8IZT8 346 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 LILRA3Q8N6C8 439 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF557Q8N988 423 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 OR7G1Q8NGA0 311 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 OR52N2Q8NGI0 321 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 APH1BQ8WW43 257 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 CAPSLQ8WWF8 208 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HTRA1Q92743 480 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GGHQ92820 318 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 UBE2E3Q969T4 207 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 COQ8BQ96D53 544 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ZC3HAV1LQ96H79 300 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 C7orf34Q96L11 122 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 COPS8Q99627 209 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 MGLLQ99685 303 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 DUSP26Q9BV47 211 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TAPBPLQ9BX59 468 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GPR174Q9BXC1 333 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 REXO4Q9GZR2 422 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PCED1AQ9H1Q7 454 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PRORYQ9H606 182 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ASB8Q9H765 288 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NIPAL2Q9H841 368 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TPT1P8Q9HAU6 139 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 IL21RQ9HBE5 538 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ZBTB20Q9HC78 741 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 TAS2R9Q9NYW1 312 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NFKBIL1Q9UBC1 381 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 VPS29Q9UBQ0 182 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 URB1O60287 2271 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ASH1LQ9NR48 2969 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 NBEAQ8NFP9 2946 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 HELZP42694 1942 aaKnown RBP5.56□□□□□ -1.52
VPS33B-203ENST00000554264 ADAMTS9Q9P2N4 1935 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 PLXNB3Q9ULL4 1909 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 IGSF10Q6WRI0 2623 aa5.56□□□□□ -1.52
VPS33B-203ENST00000554264 GON4LQ3T8J9 2241 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 IGLV3-16A0A075B6K0 115 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 A0A0D9SEW6 157 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 A0A1B0GVT2 93 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 A0A1W2PRX2 142 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 C1orf226A1L170 272 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MGAT4DA6NG13 374 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 NEDD8-MDP1E9PL57 170 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF670-ZNF695F2Z2N8 137 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 GFYI3L273 518 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PSMD11O00231 422 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 DSCR3O14972 297 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 COCHO43405 550 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SMAD6O43541 496 aaKnown RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SGTAO43765 313 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 KIAA0513O60268 411 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 KCNK2O95069 426 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 GUCA1CO95843 209 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 IGLV3-19P01714 112 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ALPPP05187 535 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PIRTP0C851 137 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ACADMP11310 421 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CYP4B1P13584 511 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms