RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ALDH16A1Q8IZ83 802 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 LINC01560Q8TB33 94 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 PYDC1Q8WXC3 89 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 DGCR14Q96DF8 476 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 DUS3LQ96G46 650 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 OR52B2Q96RD2 323 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 TIMP4Q99727 224 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZNF385DQ9H6B1 395 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 METTL7AQ9H8H3 244 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 PROK2Q9HC23 129 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZBTB26Q9HCK0 441 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 TMEM45AQ9NWC5 275 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 CPSF2Q9P2I0 782 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZNF629Q9UEG4 869 aaPredicted RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZDHHC2Q9UIJ5 367 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 ITPR3Q14573 2671 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 WASHC1A8K0Z3 465 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 CLCA1A8K7I4 914 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 SYCE1LA8MT33 242 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 GNB5O14775 395 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 UBDO15205 165 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 TMPRSS11DO60235 418 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 LILRA1O75019 489 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 TRIM3O75382 744 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 ERN1O75460 977 aaKnown RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 EEDO75530 441 aaKnown RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 AIFM1O95831 613 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 GBAP04062 536 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 FGF4P08620 206 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 FAM58BPP0C7Q3 252 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 EPXP11678 715 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 FOSL1P15407 271 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 NT5EP21589 574 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 CTSSP25774 331 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 PTX3P26022 381 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 ARRB2P32121 409 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 OPRM1P35372 400 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 PIK3CBP42338 1070 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 NUDT2P50583 147 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 CDK9P50750 372 aaKnown RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 IRF9Q00978 393 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 FLOT2Q14254 428 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 PDK3Q15120 406 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 NNATQ16517 81 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
TDP1-208ENST00000553989 FBXL19-AS1Q494R0 122 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 EIPR1Q53HC9 387 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 NSUN5P2Q63ZY6 315 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 Q71RC1 249 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 CCNYL1Q8N7R7 359 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 PCYOX1LQ8NBM8 494 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 WFDC11Q8NEX6 87 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 ZNF483Q8TF39 744 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 TSPEARQ8WU66 669 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 UBTD2Q8WUN7 234 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 KCTD4Q8WVF5 259 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 ABTB1Q969K4 478 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 NXNL1Q96CM4 212 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 DTNBP1Q96EV8 351 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 UBXN10Q96LJ8 280 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 GNRHR2Q96P88 292 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 HOPXQ9BPY8 73 aaPredicted RBP8.07□□□□□ -1.12
TDP1-208ENST00000553989 MEAF6Q9HAF1 191 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 C8orf4Q9NR00 106 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 TMCO1Q9UM00 188 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 NPFFR2Q9Y5X5 522 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 NF1P21359 2839 aa8.07□□□□□ -1.12
TDP1-208ENST00000553989 ANKHD1Q8IWZ3 2542 aaKnown RBP8.06□□□□□ -1.12
TDP1-208ENST00000553989 ARHGAP21Q5T5U3 1957 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 NCKAP5O14513 1909 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 A0A0A6YYD5 115 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 A0A1W2PR48 441 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 BBIP1A8MTZ0 92 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 H3BNX3 289 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 CFLARO15519 480 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 SIAH2O43255 324 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 SKAP2O75563 359 aaPredicted RBP8.06□□□□□ -1.12
TDP1-208ENST00000553989 ATE1O95260 518 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 HPNP05981 417 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 SBK3P0C264 359 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 UBTFL6P0CB48 400 aaPredicted RBP8.06□□□□□ -1.12
TDP1-208ENST00000553989 SLC35E2P0CK97 266 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 TMIGD3P0DMS9 266 aaPredicted RBP8.06□□□□□ -1.12
TDP1-208ENST00000553989 CYP4B1P13584 511 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 BMP7P18075 431 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 PIK3CGP48736 1102 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 PSME3P61289 254 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 DCAF7P61962 342 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 SORDQ00796 357 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 SRYQ05066 204 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 PCDH1Q08174 1060 aa8.06□□□□□ -1.12
TDP1-208ENST00000553989 DLG1Q12959 904 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms