RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TEKT2Q9UIF3 430 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 SLC13A4Q9UKG4 626 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 NPFFR2Q9Y5X5 522 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 MPDZO75970 2070 aa9.01□□□□□ -0.97
CHD8-204ENST00000553622 WDFY3Q8IZQ1 3526 aa9□□□□□ -0.97
CHD8-204ENST00000553622 TMEM200CA6NKL6 621 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ACOT8O14734 319 aa9□□□□□ -0.97
CHD8-204ENST00000553622 TO15178 435 aa9□□□□□ -0.97
CHD8-204ENST00000553622 SUV39H1O43463 412 aa9□□□□□ -0.97
CHD8-204ENST00000553622 PPM1BO75688 479 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DNAJB5O75953 348 aa9□□□□□ -0.97
CHD8-204ENST00000553622 UTS2O95399 124 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ZIC2O95409 532 aaPredicted RBP9□□□□□ -0.97
CHD8-204ENST00000553622 IL33O95760 270 aa9□□□□□ -0.97
CHD8-204ENST00000553622 F10P00742 488 aa9□□□□□ -0.97
CHD8-204ENST00000553622 CYP4B1P13584 511 aa9□□□□□ -0.97
CHD8-204ENST00000553622 KDELR2P33947 212 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DCTP40126 519 aa9□□□□□ -0.97
CHD8-204ENST00000553622 SOX3P41225 446 aa9□□□□□ -0.97
CHD8-204ENST00000553622 TMED10P49755 219 aaKnown RBP9□□□□□ -0.97
CHD8-204ENST00000553622 CCL11P51671 97 aa9□□□□□ -0.97
CHD8-204ENST00000553622 FBXW4P57775 412 aa9□□□□□ -0.97
CHD8-204ENST00000553622 MLF1P58340 268 aa9□□□□□ -0.97
CHD8-204ENST00000553622 MEP1AQ16819 746 aa9□□□□□ -0.97
CHD8-204ENST00000553622 GRAMD1BQ3KR37 738 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DESI1Q6ICB0 168 aa9□□□□□ -0.97
CHD8-204ENST00000553622 LCN8Q6JVE9 175 aa9□□□□□ -0.97
CHD8-204ENST00000553622 JMJD6Q6NYC1 403 aaPredicted RBP9□□□□□ -0.97
CHD8-204ENST00000553622 IL20RBQ6UXL0 311 aa9□□□□□ -0.97
CHD8-204ENST00000553622 UNQ6494/PRO21346Q6UXR6 183 aa9□□□□□ -0.97
CHD8-204ENST00000553622 LINC00696Q6ZRV3 163 aa9□□□□□ -0.97
CHD8-204ENST00000553622 FKBP9P1Q75LS8 142 aa9□□□□□ -0.97
CHD8-204ENST00000553622 BEST3Q8N1M1 668 aa9□□□□□ -0.97
CHD8-204ENST00000553622 GALNT16Q8N428 558 aa9□□□□□ -0.97
CHD8-204ENST00000553622 OR52P1PQ8NH57 321 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ZCCHC14Q8WYQ9 949 aaKnown RBP9□□□□□ -0.97
CHD8-204ENST00000553622 LZICQ8WZA0 190 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DIO2Q92813 273 aa9□□□□□ -0.97
CHD8-204ENST00000553622 TAMM41Q96BW9 452 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ZNF354BQ96LW1 612 aa9□□□□□ -0.97
CHD8-204ENST00000553622 RASL10BQ96S79 203 aa9□□□□□ -0.97
CHD8-204ENST00000553622 SPATA5L1Q9BVQ7 753 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ZNF350Q9GZX5 532 aa9□□□□□ -0.97
CHD8-204ENST00000553622 SLC38A1Q9H2H9 487 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DENND2DQ9H6A0 471 aaPredicted RBP9□□□□□ -0.97
CHD8-204ENST00000553622 MTHFD2LQ9H903 347 aaPredicted RBP9□□□□□ -0.97
CHD8-204ENST00000553622 CPNE5Q9HCH3 593 aa9□□□□□ -0.97
CHD8-204ENST00000553622 POLE3Q9NRF9 147 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ANKRD10Q9NXR5 420 aa9□□□□□ -0.97
CHD8-204ENST00000553622 FLRT3Q9NZU0 649 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ABI3Q9P2A4 366 aa9□□□□□ -0.97
CHD8-204ENST00000553622 DKK4Q9UBT3 224 aa9□□□□□ -0.97
CHD8-204ENST00000553622 RPS6KA6Q9UK32 745 aa9□□□□□ -0.97
CHD8-204ENST00000553622 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
CHD8-204ENST00000553622 AURKCQ9UQB9 309 aa9□□□□□ -0.97
CHD8-204ENST00000553622 YARS2Q9Y2Z4 477 aaKnown RBP9□□□□□ -0.97
CHD8-204ENST00000553622 RRP15Q9Y3B9 282 aaKnown RBP9□□□□□ -0.97
CHD8-204ENST00000553622 ZNF451Q9Y4E5 1061 aa9□□□□□ -0.97
CHD8-204ENST00000553622 NCOR2Q9Y618 2525 aa9□□□□□ -0.97
CHD8-204ENST00000553622 IGF2RP11717 2491 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 SCDO00767 359 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 SCO2O43819 266 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 KIAA0513O60268 411 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 TSPAN2O60636 221 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ZNF354AO60765 605 aaPredicted RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 ABCB7O75027 752 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ICOSLGO75144 302 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 UGT2B11O75310 529 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 OR6B1O95007 311 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 NADKO95544 446 aaPredicted RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 DBIP07108 87 aaKnown RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 ETS2P15036 469 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 IL7RP16871 459 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ITPKBP27987 946 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 CASRP41180 1078 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 PCBP3P57721 371 aaKnown RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 PSPHP78330 225 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 OC90Q02509 493 aaPredicted RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 DMTNQ08495 405 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 CCNIQ14094 377 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 EFR3AQ14156 821 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 LARS2Q15031 903 aaKnown RBP8.99□□□□□ -0.97
CHD8-204ENST00000553622 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD8-204ENST00000553622 MTX3Q5HYI7 312 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ZNF311Q5JNZ3 666 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ACER2Q5QJU3 275 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 PDZK1Q5T2W1 519 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 PRAMEF8Q5VWM4 474 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 PRAMEF7Q5VXH5 474 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 OPN5Q6U736 354 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ENPP6Q6UWR7 440 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 CCDC80Q76M96 950 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 VRK2Q86Y07 508 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 SLC15A4Q8N697 577 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 GATSQ8NAP1 163 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 ZNF527Q8NB42 609 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 FAM110BQ8TC76 370 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 PROX1Q92786 737 aa8.99□□□□□ -0.97
CHD8-204ENST00000553622 STMN2Q93045 179 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms