RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TRA2BP62995 288 aaKnown RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 PSPHP78330 225 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 MRPS22P82650 360 aaKnown RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 FAPQ12884 760 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 TSC22D1Q15714 1073 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 UAP1Q16222 522 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 TMEM44Q2T9K0 475 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 CHRFAM7AQ494W8 412 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ADAM5Q6NVV9 412 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ATG4DQ86TL0 474 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 MARCH3Q86UD3 253 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 FAM9CQ8IZT9 166 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 OR10D3Q8NH80 312 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 DUSP19Q8WTR2 217 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 FBXW5Q969U6 566 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ERP27Q96DN0 273 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ZBED6CLQ96FA7 236 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 GMPPAQ96IJ6 420 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 NPAS1Q99742 590 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ERP44Q9BS26 406 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 PRRG4Q9BZD6 226 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 VPS11Q9H270 941 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 PTGES2Q9H7Z7 377 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 BRF2Q9HAW0 419 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 TAS2R9Q9NYW1 312 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 SENP1Q9P0U3 644 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 XPR1Q9UBH6 696 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 RNF14Q9UBS8 474 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ABCG2Q9UNQ0 655 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 LIPT1Q9Y234 373 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 RNF115Q9Y4L5 304 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ABCA1O95477 2261 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 FAM187AA6NFU0 413 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 A8MV72 311 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 ZSCAN12O43309 604 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 RAD51CO43502 376 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 PCDH7O60245 1069 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 PLOD3O60568 738 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 OPN1LWP04000 364 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 THBS1P07996 1170 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 CHN1P15882 459 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 PSMB1P20618 241 aaKnown RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 IL11P20809 199 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 TYK2P29597 1187 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 AGTR1P30556 359 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 MAGEA4P43358 317 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 RFX3P48380 749 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SERPINB8P50452 374 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 PLTPP55058 493 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 CDH13P55290 713 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 RAE1P78406 368 aaKnown RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 DNM1P46Q6ZS02 220 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 BEND4Q6ZU67 534 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF619Q8N2I2 560 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 KBTBD8Q8NFY9 601 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 FBXO25Q8TCJ0 367 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SMAP2Q8WU79 429 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 S100PBPQ96BU1 408 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 ADGRG7Q96K78 797 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 TACO1Q9BSH4 297 aaKnown RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 OR10A4Q9H209 315 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SLC35C2Q9NQQ7 365 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SDHAF3Q9NRP4 125 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 FAM120CQ9NX05 1096 aaKnown RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 MCM8Q9UJA3 840 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF225Q9UK10 706 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SNX6Q9UNH7 406 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 VDAC3Q9Y277 283 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 GPR52Q9Y2T5 361 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 SAR1BQ9Y6B6 198 aa8.11□□□□□ -1.11
SYNE2-209ENST00000553308 A0A1W2PP18 115 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GNG14A0A1W2PPG7 69 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 CXCL13O43927 109 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GPRIN2O60269 458 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 COQ9O75208 318 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GCM2O75603 506 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 OR4F21O95013 312 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 NTN1O95631 604 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 OTCP00480 354 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 CD3EP07766 207 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 FAM157CP0CG43 387 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 TRADDQ15628 312 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 DECR1Q16698 335 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 PGGHGQ32M88 737 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 KRTAP24-1Q3LI83 254 aa8.1□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF672Q499Z4 452 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-209ENST00000553308 GLYR1Q49A26 553 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms