RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SORBS1Q9BX66 1292 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TRIM54Q9BYV2 358 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 OR2B2Q9GZK3 357 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ROGDIQ9GZN7 287 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 MMP27Q9H306 513 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CDC42EP4Q9H3Q1 356 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 UNKLQ9H9P5 680 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 RNF122Q9H9V4 155 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SMYD2Q9NRG4 433 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 KLHL21Q9UJP4 597 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ING1Q9UK53 422 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 POU2F3Q9UKI9 436 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 AMFRQ9UKV5 643 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 USP22Q9UPT9 525 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 R3HDM2Q9Y2K5 976 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 GRIP1Q9Y3R0 1128 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CLDN16Q9Y5I7 305 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SVEP1Q4LDE5 3571 aa4.59□□□□□ -1.68
CKAP4-203ENST00000553039 RAI1Q7Z5J4 1906 aaPredicted RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 IGHV4-61A0A0C4DH41 118 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 MYOCOSA0A1B0GUC4 107 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 HMX2A2RU54 273 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ERI2A8K979 691 aaKnown RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 BTNL10A8MVZ5 291 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 M0QZ24 198 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 CYR61O00622 381 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 PIN1P1O15428 100 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ICOSLGO75144 302 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM127O75204 238 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 LRATO95237 230 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 IGKV3-11P04433 115 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ANXA2P07355 339 aaKnown RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TNNT1P13805 278 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 MALP21145 153 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 PTNP21246 168 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 SLC6A9P48067 706 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 CDH11P55287 796 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 FBXW4P57775 412 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TBPL1P62380 186 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 VAMP2P63027 116 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ACVR1Q04771 509 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 NR1I3Q14994 352 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 P2RY6Q15077 328 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TAB1Q15750 504 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TOR1AIP1Q5JTV8 583 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF470Q6ECI4 717 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 LRRC8EQ6NSJ5 796 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM81Q6P7N7 255 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 AGTRAPQ6RW13 159 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF793Q6ZN11 406 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 RINLQ6ZS11 566 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 APTXQ7Z2E3 356 aaKnown RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 GLCCI1Q86VQ1 547 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 P2RY8Q86VZ1 359 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 CNGA4Q8IV77 575 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 LRRC8AQ8IWT6 810 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 C9orf40Q8IXQ3 194 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 OR8H2Q8N162 312 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TXLNBQ8N3L3 684 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 SVOPLQ8N434 492 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 OTUD6BQ8N6M0 293 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 PRELID2Q8N945 189 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 SYT14Q8NB59 555 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 SRFBP1Q8NEF9 429 aaKnown RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 KBTBD8Q8NFY9 601 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TRIM58Q8NG06 486 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 RDH11Q8TC12 318 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 FIG4Q92562 907 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 MUL1Q969V5 352 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 S100PBPQ96BU1 408 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 IQCDQ96DY2 449 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 FBXL20Q96IG2 436 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 GMPPAQ96IJ6 420 aaPredicted RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 GAL3ST4Q96RP7 486 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 GORASP1Q9BQQ3 440 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 PELOQ9BRX2 385 aaKnown RBP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 TRMOQ9BU70 441 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 PINK1Q9BXM7 581 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 KLHL31Q9H511 634 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 FN3KRPQ9HA64 309 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 HEY2Q9UBP5 337 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 NENFQ9UMX5 172 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 DAPP1Q9UN19 280 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.58□□□□□ -1.68
CKAP4-203ENST00000553039 FREM3P0C091 2139 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 HEATR5BQ9P2D3 2071 aa4.58□□□□□ -1.68
CKAP4-203ENST00000553039 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 A0A1W2PR48 441 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 LRIT2A6NDA9 550 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SHISA9B4DS77 424 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 B9A039 149 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 AKR1B15C9JRZ8 316 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 APOC4-APOC2K7ER74 178 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 TIMM23O14925 209 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 RAMP1O60894 148 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 LDB3O75112 727 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms