RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 GRHL3Q8TE85 626 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 PNPLA2Q96AD5 504 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TMEM125Q96AQ2 219 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 ROPN1LQ96C74 230 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 ZG16BQ96DA0 208 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 SECISBP2Q96T21 854 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 SAP130Q9H0E3 1048 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 RAD21L1Q9H4I0 556 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 RUBCNLQ9H714 662 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 KAT8Q9H7Z6 458 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TIMMDC1Q9NPL8 285 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 CMTM6Q9NX76 183 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 RALYQ9UKM9 306 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 ATRXP46100 2492 aa11.96□□□□□ -0.5
RAB5C-206ENST00000550406 HEATR5AQ86XA9 2040 aa11.96□□□□□ -0.5
RAB5C-206ENST00000550406 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 C17orf51A8MQB3 221 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 EVPLLA8MZ36 301 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 B4DXG7 233 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 TP53I11O14683 189 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 ABCB7O75027 752 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 SORBS2O94875 1100 aaKnown RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 UTS2O95399 124 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 GUSBP08236 651 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 ARAFP10398 606 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 CD46P15529 392 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 CNR1P21554 472 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 DNASE1L1P49184 302 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 NUDT2P50583 147 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 GPR85P60893 370 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 CHRNEQ04844 493 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 KLRB1Q12918 225 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 EFR3AQ14156 821 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 FNDC7Q5VTL7 733 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 C6orf89Q6UWU4 347 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 SLC38A5Q8WUX1 472 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 MAL2Q969L2 176 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 THUMPD3Q9BV44 507 aaKnown RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 ANGPTL4Q9BY76 406 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF350Q9GZX5 532 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 SLC38A1Q9H2H9 487 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 SACM1LQ9NTJ5 587 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 EXD2Q9NVH0 621 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 MRTO4Q9UKD2 239 aaKnown RBP11.95□□□□□ -0.5
RAB5C-206ENST00000550406 MKLN1Q9UL63 735 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 USP22Q9UPT9 525 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 PCDHGB3Q9Y5G1 929 aa11.95□□□□□ -0.5
RAB5C-206ENST00000550406 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 CENPVL1A0A0U1RR11 272 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 ANKRD33BA6NCL7 494 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 CCT8L1PA6NM43 557 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 NME4O00746 187 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 PEX1O43933 1283 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 TRIM3O75382 744 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 WISP2O76076 250 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 UBOX5O94941 541 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 H6PDO95479 791 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 OXSR1O95747 527 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 AGR2O95994 175 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 AK1P00568 194 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 P04436 131 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 TBXA2RP21731 343 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 KRT20P35900 424 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 CPOXP36551 454 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 PSMD4P55036 377 aaKnown RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 PSME3P61289 254 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 PMP22Q01453 160 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 FOXO1Q12778 655 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 ART3Q13508 389 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 MAPK14Q16539 360 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 RPUSD3Q6P087 351 aaKnown RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 LRRC74BQ6ZQY2 392 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 C16orf62Q7Z3J2 963 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 NET1Q7Z628 596 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 ZZZ3Q8IYH5 903 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 POGLUT1Q8NBL1 392 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 OR2M7Q8NG81 312 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 OR8J3Q8NGG0 315 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 OR10A6Q8NH74 314 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 TMCO6Q96DC7 493 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 C5orf34Q96MH7 638 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF583Q96ND8 569 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms