RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 OR9A2Q8NGT5 310 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MOAP1Q96BY2 351 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ZMYND19Q96E35 227 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 DNAJA3Q96EY1 480 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 B3GNT4Q9C0J1 378 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MED20Q9H944 212 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NUP50Q9UKX7 468 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 KANTRA0A1W2PQU2 76 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 OR2AT4A6NND4 320 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 DSCR3O14972 297 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 AKR7A2O43488 359 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PLATP00750 562 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TFP02787 698 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 S100A6P06703 90 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 GABRA3P34903 492 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PRLHRP49683 370 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CRYZQ08257 329 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MGAT3Q09327 533 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ASAH1Q13510 395 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TRAM1Q15629 374 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NNATQ16517 81 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ACSM3Q53FZ2 586 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SYT14P1Q58G82 188 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PRAMEF17Q5VTA0 474 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SAXO2Q658L1 398 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ERN2Q76MJ5 926 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CCDC190Q86UF4 302 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TMPRSS12Q86WS5 348 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ZNF683Q8IZ20 524 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SPACA7Q96KW9 195 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 C7orf34Q96L11 122 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CPEB1Q9BZB8 566 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NT5DC2Q9H857 520 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SPATA6Q9NWH7 488 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TEX10Q9NXF1 929 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 BABAM2Q9NXR7 383 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SIPA1L1O43166 1804 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ARPC5O15511 151 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 RBBP9O75884 186 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 CSF3P09919 207 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 GKN3PP0CG01 181 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 NPPBP16860 134 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 SHC1P29353 583 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 MAP3K8P41279 467 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC22A10Q63ZE4 541 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ACSM5Q6NUN0 579 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ENPP7Q6UWV6 458 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 LRRC28Q86X40 367 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 OR6F1Q8NGZ6 308 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ACOT11Q8WXI4 607 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 LRIG1Q96JA1 1093 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 TRPV4Q9HBA0 871 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 HCFC1R1Q9NWW0 138 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 USP36Q9P275 1121 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 OR1A2Q9Y585 309 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 IGLON5A6NGN9 336 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 FOXE1O00358 373 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 TGM5O43548 720 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 VEGFDO43915 354 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 KRT33AO76009 404 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ECDO95905 644 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 VAMP1P23763 118 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 SNRPGP62308 76 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 CHRNEQ04844 493 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 HYAL2Q12891 473 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ENPP2Q13822 863 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 EFR3AQ14156 821 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 C2orf27AQ580R0 203 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 EID2BQ96D98 161 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 GAL3ST4Q96RP7 486 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 S100A13Q99584 98 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 PINK1Q9BXM7 581 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 NIPAL2Q9H841 368 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 HHATLQ9HCP6 504 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 KLHL21Q9UJP4 597 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 FARSAQ9Y285 508 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 GFYI3L273 518 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 TRIM3O75382 744 aaPredicted RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 PPP1R3DO95685 299 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 APODP05090 189 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 RHOP08100 348 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 CERS1P27544 350 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 GRK5P34947 590 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 KCNJ5P48544 419 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ACTC1P68032 377 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 ACTA1P68133 377 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 MPP7Q5T2T1 576 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 PEG10Q86TG7 708 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 OR2A12Q8NGT7 310 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms