RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 RINLQ6ZS11 566 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 HPS6Q86YV9 775 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 RBM15BQ8NDT2 890 aaKnown RBP19.46■□□□□ 0.71
VPS29-206ENST00000549578 SPPL2AQ8TCT8 520 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 PAQR8Q8TEZ7 354 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TMEM19Q96HH6 336 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TRNT1Q96Q11 434 aaKnown RBP19.46■□□□□ 0.71
VPS29-206ENST00000549578 ZNF350Q9GZX5 532 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 SLC25A18Q9H1K4 315 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 RUBCNLQ9H714 662 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 A4GALTQ9NPC4 353 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TIMMDC1Q9NPL8 285 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 MKLN1Q9UL63 735 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 L3MBTL1Q9Y468 752 aa19.46■□□□□ 0.71
VPS29-206ENST00000549578 TLN1Q9Y490 2541 aaKnown RBP19.45■□□□□ 0.7
VPS29-206ENST00000549578 NME4O00746 187 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 STX11O75558 287 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 SP1P08047 785 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 ARAFP10398 606 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 CD46P15529 392 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 CPOXP36551 454 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 GZMMP51124 257 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 HPCAP84074 193 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 GRAMD1BQ3KR37 738 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 FLYWCH1Q4VC44 716 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 ZNF766Q5HY98 468 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 SLC22A10Q63ZE4 541 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 FRRS1Q6ZNA5 592 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 Q6ZS92 163 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 SERPINA11Q86U17 422 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 PTOV1Q86YD1 416 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 PGAM4Q8N0Y7 254 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 OR4C3Q8NH37 302 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 TMCO6Q96DC7 493 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 C5orf34Q96MH7 638 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 GMPR2Q9P2T1 348 aaKnown RBP19.45■□□□□ 0.7
VPS29-206ENST00000549578 CNOT11Q9UKZ1 510 aaKnown RBP19.45■□□□□ 0.7
VPS29-206ENST00000549578 USP22Q9UPT9 525 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 WDR45Q9Y484 360 aa19.45■□□□□ 0.7
VPS29-206ENST00000549578 EML6Q6ZMW3 1958 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 BSNQ9UPA5 3926 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 TRAV17A0A0B4J275 112 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 TMEM247A6NEH6 219 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 GPR85P60893 370 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 CHRNEQ04844 493 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 GPR68Q15743 365 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 NADK2Q4G0N4 442 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 RPS26P11Q5JNZ5 115 aaPredicted RBP19.44■□□□□ 0.7
VPS29-206ENST00000549578 TYW3Q6IPR3 259 aaKnown RBP19.44■□□□□ 0.7
VPS29-206ENST00000549578 SLC25A25Q6KCM7 469 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 C16orf89Q6UX73 402 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 NET1Q7Z628 596 aaPredicted RBP19.44■□□□□ 0.7
VPS29-206ENST00000549578 HMGN2P46Q86SG4 172 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 CALHM3Q86XJ0 350 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 ZZZ3Q8IYH5 903 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 DEFB107AQ8IZN7 70 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 NFKBIDQ8NI38 313 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 GRHL3Q8TE85 626 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 ZNF583Q96ND8 569 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 SLC38A1Q9H2H9 487 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 TMEM38AQ9H6F2 299 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 SPAG4Q9NPE6 437 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 SACM1LQ9NTJ5 587 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 B3GNT3Q9Y2A9 372 aa19.44■□□□□ 0.7
VPS29-206ENST00000549578 KMT2BQ9UMN6 2715 aaPredicted RBP19.44■□□□□ 0.7
VPS29-206ENST00000549578 A0A0G2JMM0 328 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 A0A1W2PPB8 328 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 A0A1W2PRS3 328 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 KIR3DP1A8MWS1 328 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 P04436 131 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 SFTPCP11686 197 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 CDK6Q00534 326 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 BNIP1Q12981 228 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 ZNF169Q14929 603 aaPredicted RBP19.43■□□□□ 0.7
VPS29-206ENST00000549578 SLC6A19Q695T7 634 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 LRRC74BQ6ZQY2 392 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 GALNTL5Q7Z4T8 443 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 IFNEQ86WN2 208 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 FBXW8Q8N3Y1 598 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 WBP1Q96G27 269 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 SCMH1Q96GD3 660 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 SECISBP2Q96T21 854 aaKnown RBP19.43■□□□□ 0.7
VPS29-206ENST00000549578 METTL7AQ9H8H3 244 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 GALNT9Q9HCQ5 603 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 DEPPQ9NTK1 212 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 NDE1Q9NXR1 346 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 ADA2Q9NZK5 511 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 CNIH4Q9P003 139 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 LUZP4Q9P127 313 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 ABCD2Q9UBJ2 740 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 PACSIN3Q9UKS6 424 aa19.43■□□□□ 0.7
VPS29-206ENST00000549578 PRAMEF25A6NGN4 478 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 KIAA0513O60268 411 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 NME2P1O60361 137 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 OXSR1O95747 527 aaPredicted RBP19.42■□□□□ 0.7
VPS29-206ENST00000549578 NME2P22392 152 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 EVI2BP34910 448 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 DCTP40126 519 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 CASP3P42574 277 aa19.42■□□□□ 0.7
VPS29-206ENST00000549578 CRISP3P54108 245 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms