RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ALDH3B1P43353 468 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 NAGLUP54802 743 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CASP6P55212 293 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 B3GALT5-AS1P59052 145 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SKP2Q13309 424 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ANGPT1Q15389 498 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SSX1Q16384 188 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TSTQ16762 297 aaKnown RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 IMPG1Q17R60 797 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CRTC3Q6UUV7 619 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GPR180Q86V85 440 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SIAH3Q8IW03 269 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF619Q8N2I2 560 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC63Q8NA47 563 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 OR5AR1Q8NGP9 310 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 BCAS4Q8TDM0 211 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 GEMIN6Q8WXD5 167 aaKnown RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 THRSPQ92748 146 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PYURFQ96I23 114 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 MAPKAP1Q9BPZ7 522 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 TAPBPLQ9BX59 468 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 OSBPL11Q9BXB4 747 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 SPNS1Q9H2V7 528 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 ZDHHC11Q9H8X9 412 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 CAB39LQ9H9S4 337 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PROK2Q9HC23 129 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 PAQR5Q9NXK6 330 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-212ENST00000549162 WWOXQ9NZC7 414 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 MGAT4BQ9UQ53 548 aa4.51□□□□□ -1.69
SCAF11-212ENST00000549162 A0A0B4J2E0 115 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1B0GX12 115 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FAM47E-STBD1D6RA91 191 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 AKAP8O43823 692 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TMPRSS11DO60235 418 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ENTPD5O75356 428 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 JUNP05412 331 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RNH1P13489 461 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 AKT1P31749 480 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ACAA2P42765 397 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 HNRNPH2P55795 449 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MLF1P58340 268 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MC1RQ01726 317 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ID3Q02535 119 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SLC34A1Q06495 639 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CHIT1Q13231 466 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 BMPR2Q13873 1038 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FASTKQ14296 549 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TRIP13Q15645 432 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TOMM34Q15785 309 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MUM1Q2TAK8 710 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ANKRD37Q7Z713 158 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 LRRC25Q8N386 305 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ARL6IP6Q8N6S5 226 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 APCDD1LQ8NCL9 501 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SLC25A43Q8WUT9 341 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ING5Q8WYH8 240 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM54Q969K7 222 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MRI1Q9BV20 369 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FAM192AQ9GZU8 254 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SLC38A1Q9H2H9 487 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 KRT84Q9NSB2 600 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 IL20Q9NYY1 176 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF107Q9UII5 783 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF229Q9UJW7 825 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RCE1Q9Y256 329 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF175Q9Y473 711 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 NCOA6Q14686 2063 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 LOC390937A0A1W2PQ73 354 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 E5RI56 91 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CA11O75493 328 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 UBL4AP11441 157 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FPR1P21462 350 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TGM4P49221 684 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SH3BGRP55822 239 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 PSME3P61289 254 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RUNX2Q13950 521 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 PCSK7Q16549 785 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC157Q569K6 752 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF691Q5VV52 312 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ACOT4Q8N9L9 421 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 OR8H1Q8NGG4 311 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 OR2Y1Q8NGV0 311 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SLC38A4Q969I6 547 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 EFHD2Q96C19 240 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CLPTM1LQ96KA5 538 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 WRAP53Q9BUR4 548 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 DUSP26Q9BV47 211 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 GLIPR2Q9H4G4 154 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 A4GNTQ9UNA3 340 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SF3B6Q9Y3B4 125 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RHBDD3Q9Y3P4 386 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 PCDHGB5Q9Y5G0 923 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MYO18AQ92614 2054 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 OR52A4PA6NMU1 304 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 P2RX6O15547 441 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 PCDH7O60245 1069 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 LCMT2O60294 686 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MYO1DO94832 1006 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms