RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 E9PI62 339 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 RGS13O14921 159 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 CLDN7O95471 211 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 INHAP05111 366 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ALDOCP09972 364 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 NR0B1P51843 470 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 CAP1Q01518 475 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TLE3Q04726 772 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 FAM110CQ1W6H9 321 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ALG1LQ6GMV1 187 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 PNPLA2Q96AD5 504 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 DCLRE1CQ96SD1 692 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 SDHAF2Q9NX18 166 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ASIC5Q9NY37 505 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TRAPPC4Q9Y296 219 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 V9GY05 133 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ECM29Q5VYK3 1845 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 A0A1W2PS29 197 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 RAD51DO75771 328 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 CD3GP09693 182 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 LAMP1P11279 417 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TUBG1P23258 451 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 AK4P27144 223 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 MAOBP27338 520 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 FCN2Q15485 313 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 UBE2NLQ5JXB2 153 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 PARGQ86W56 976 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 OR9Q2Q8NGE9 314 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ACOT11Q8WXI4 607 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 PMEPA1Q969W9 287 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ZBTB8AQ96BR9 441 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ARPC5LQ9BPX5 153 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ORAI3Q9BRQ5 295 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TRMT61BQ9BVS5 477 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 ERVMER34-1Q9H9K5 563 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TXNL4BQ9NX01 149 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 GOLGA4Q13439 2230 aaKnown RBP12.12□□□□□ -0.47
PTCH1-212ENST00000546744 COL4A5P29400 1685 aa12.12□□□□□ -0.47
PTCH1-212ENST00000546744 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 NPIPA5E9PKD4 350 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 F7P08709 466 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SBK2P0C263 348 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CD53P19397 219 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 KCNC1P48547 511 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ARSDP51689 593 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 GALK2Q01415 458 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 DBPQ10586 325 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ITPRIPL2Q3MIP1 535 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 HIST2H3PS2Q5TEC6 136 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 PDZD3Q86UT5 571 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 LAX1Q8IWV1 398 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 STK35Q8TDR2 534 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 MICU1Q9BPX6 476 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SLC5A7Q9GZV3 580 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 DUS2Q9NX74 493 aaKnown RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 NPIPA1Q9UND3 350 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 NOX1Q9Y5S8 564 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF726A6NNF4 738 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CRTAPO75718 401 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ATG12O94817 140 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 HTR3BO95264 441 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ALPIP09923 528 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SDC1P18827 310 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 AFF3P51826 1226 aaKnown RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 HCCSP53701 268 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 TAS2R20P59543 309 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ERVFC1P60507 584 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 C1QTNF12Q5T7M4 302 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 LSMEM2Q8N112 164 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 TRAM1L1Q8N609 369 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ZFP41Q8N8Y5 198 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 OR52N1Q8NH53 320 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 TTC9Q92623 222 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 MYOCQ99972 504 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SLC25A21Q9BQT8 299 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CDCA4Q9BXL8 241 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 PRODH2Q9UF12 536 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CA12O43570 354 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 POP7O75817 140 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms