RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 C2orf92A0A1B0GVN3 265 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ANKRD34BA5PLL1 514 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 FRG2CA6NGY1 282 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TMEM200CA6NKL6 621 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 A8MUI8 341 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 WWP2O00308 870 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 NDUFAB1O14561 156 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 RFXANKO14593 260 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ANGPT2O15123 496 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TPD52L2O43399 206 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 EMC8O43402 210 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CCDC22O60826 627 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 NME6O75414 186 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ERN1O75460 977 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ITGA10O75578 1167 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 BCAS2O75934 225 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 DCTN3O75935 186 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 OR2J2O76002 312 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CD3EP07766 207 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 KRT16P08779 473 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 IFNGR1P15260 489 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CD1EP15812 388 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ADSLP30566 484 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CDKN2CP42773 168 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 EMDP50402 254 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CORO7P57737 925 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SRSF3P84103 164 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MVKQ03426 396 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 KLF10Q13118 480 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 LASP1Q14847 261 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MAPKAPK3Q16644 382 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MEP1AQ16819 746 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 LINC00303Q3SY05 128 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 VPS26BQ4G0F5 336 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 LACTB2Q53H82 288 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MFSD12Q6NUT3 480 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 H3F3CQ6NXT2 135 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 BHLHB9Q6PI77 547 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 VHLLQ6RSH7 139 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ANGPTL8Q6UXH0 198 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ISLR2Q6UXK2 745 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 NPSR1Q6W5P4 371 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 C16orf47Q6ZP98 133 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 LINC00696Q6ZRV3 163 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 PIGWQ7Z7B1 504 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MTDHQ86UE4 582 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SNX32Q86XE0 403 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 BEST3Q8N1M1 668 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TRIML2Q8N7C3 387 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CCDC197Q8NCU1 140 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 C17orf47Q8NEP4 570 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 OR5L2Q8NGL0 311 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 GOT1L1Q8NHS2 421 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 C9orf43Q8TAL5 461 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SLC22A8Q8TCC7 542 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TM9SF4Q92544 642 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 JADE3Q92613 823 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 GTF2H4Q92759 462 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ANAPC16Q96DE5 110 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 GIMAP5Q96F15 307 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ITCHQ96J02 903 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SLC35G5Q96KT7 338 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 RASL10BQ96S79 203 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SMAD5Q99717 465 aaKnown RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SLC35A5Q9BS91 424 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 INPP5KQ9BT40 448 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TRIM4Q9C037 500 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 ADNPQ9H2P0 1102 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 C3orf14Q9HBI5 128 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 SLC52A3Q9NQ40 469 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 NTMQ9P121 344 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MYOTQ9UBF9 498 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 CGGBP1Q9UFW8 167 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
PRKDC-211ENST00000546304 VPS4AQ9UN37 437 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 TP53TG5Q9Y2B4 290 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 MYO18BQ8IUG5 2567 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 NINQ8N4C6 2090 aa5.84□□□□□ -1.47
PRKDC-211ENST00000546304 DNAJC13O75165 2243 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 A0A096LPI6 279 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 A0A1W2PP18 115 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 BBIP1A8MTZ0 92 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 A8MVJ9 347 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ACOX3O15254 700 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NADKO95544 446 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ANP32DO95626 131 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CPSF4O95639 269 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 HMGN2P05204 90 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SNRPB2P08579 225 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ZCCHC18P0CG32 403 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 HOXB9P17482 250 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 UQCRC2P22695 453 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 PTPN6P29350 595 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CHI3L1P36222 383 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CASRP41180 1078 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SOX3P41225 446 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TRPC1P48995 793 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CCT3P49368 545 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms