RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 NKD1Q969G9 470 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 TP53INP1Q96A56 240 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 NXPE2Q96DL1 559 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 CENPNQ96H22 339 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-209ENST00000545305 BDH2Q9BUT1 245 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 QRSL1Q9H0R6 528 aaKnown RBP12.74□□□□□ -0.37
SCARB1-209ENST00000545305 SEMA6AQ9H2E6 1030 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 IL1RAPQ9NPH3 570 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 ASCL3Q9NQ33 180 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 DNAJB9Q9UBS3 223 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF223Q9UK11 482 aaPredicted RBP12.74□□□□□ -0.37
SCARB1-209ENST00000545305 SH3GLB1Q9Y371 365 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
SCARB1-209ENST00000545305 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 TMEM229AB2RXF0 380 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 PEX12O00623 359 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 HS6ST1O60243 411 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 IL33O95760 270 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 HPP00738 406 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 LIPCP11150 499 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 PTDSS1P48651 473 aaKnown RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 VLDLRP98155 873 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 DUSP7Q16829 419 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 HMBOX1Q6NT76 420 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 KIRREL2Q6UWL6 708 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 CYP4Z1Q86W10 505 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 CARM1Q86X55 608 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 VRK2Q86Y07 508 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 TMEM102Q8N9M5 508 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF527Q8NB42 609 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 ICA1LQ8NDH6 482 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 GPR32P1Q8NGA4 272 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 M1APQ8TC57 530 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 OIT3Q8WWZ8 545 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 TMBIM1Q969X1 311 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF347Q96SE7 839 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 HOXD1Q9GZZ0 328 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 GPN2Q9H9Y4 310 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 FBXO34Q9NWN3 711 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 FAM32AQ9Y421 112 aaKnown RBP12.73□□□□□ -0.37
SCARB1-209ENST00000545305 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 AK5Q9Y6K8 562 aa12.73□□□□□ -0.37
SCARB1-209ENST00000545305 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
SCARB1-209ENST00000545305 NPIPA5A0A0B4J1W7 369 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 NPIPA7E9PJI5 369 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 E2F6O75461 281 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 REM1O75628 298 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 NPIPA8P0DM63 369 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ICAM2P13598 275 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 NID1P14543 1247 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 HPGDP15428 266 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 TNFRSF1BP20333 461 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 GCKP35557 465 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 DCTP40126 519 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 VHLP40337 213 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 OR1E2P47887 323 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ATP12AP54707 1039 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 RTP5Q14D33 572 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 GRAMD1BQ3KR37 738 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 RNF220Q5VTB9 566 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 MRGPREQ86SM8 312 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 PRR22Q8IZ63 422 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 VANGL1Q8TAA9 524 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-209ENST00000545305 SLC22A8Q8TCC7 542 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 EME1Q96AY2 570 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 EFHD2Q96C19 240 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-209ENST00000545305 OMA1Q96E52 524 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 C7orf34Q96L11 122 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 IMMP1LQ96LU5 166 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 VCXQ9H320 206 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 EVA1AQ9H8M9 152 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ZNF160Q9HCG1 818 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 MMP25Q9NPA2 562 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-209ENST00000545305 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 ABCG2Q9UNQ0 655 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
SCARB1-209ENST00000545305 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-209ENST00000545305 CDC14CA4D256 554 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
SCARB1-209ENST00000545305 UGT2B17O75795 530 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 UTS2O95399 124 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 LGI1O95970 557 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 F8A1P23610 371 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 PEX2P28328 305 aa12.71□□□□□ -0.37
SCARB1-209ENST00000545305 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms