RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TP53I3Q53FA7 332 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 PRAMEF8Q5VWM4 474 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 PRAMEF7Q5VXH5 474 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 ZNF471Q9BX82 626 aaPredicted RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 CNOT11Q9UKZ1 510 aaKnown RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 IER3IP1Q9Y5U9 82 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 DNMT3AQ9Y6K1 912 aaPredicted RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 HSPE1-MOB4S4R3N1 261 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 ISPDA4D126 451 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 DNAJB5O75953 348 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 GABARAPL2P60520 117 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 SNTB2Q13425 540 aaKnown RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 HES5Q5TA89 166 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 ZNF765Q7L2R6 523 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 PRSS48Q7RTY5 328 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 PHOSPHO2Q8TCD6 241 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 ADOQ96SZ5 270 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 INSM2Q96T92 566 aaPredicted RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
CHD4-211ENST00000544484 FUT1P19526 365 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 MSX1P28360 303 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 C6orf183Q5T699 404 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 OR5M10Q6IEU7 315 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 SLC18B1Q6NT16 456 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 GALNT6Q8NCL4 622 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 AIFM2Q9BRQ8 373 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 HOXD1Q9GZZ0 328 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 PCDHA9Q9Y5H5 950 aa12.08□□□□□ -0.48
CHD4-211ENST00000544484 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 CXCL12P48061 93 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 CSNK1DP48730 415 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 VEZF1Q14119 521 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 PIP5KL1Q5T9C9 394 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 SFRP4Q6FHJ7 346 aaPredicted RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 EIF5AL1Q6IS14 154 aaKnown RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 NRG4Q8WWG1 115 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 OR5B2Q96R09 309 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 OR10A4Q9H209 315 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 SLC33A1O00400 549 aaPredicted RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 RAB3BP20337 219 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 SQSTM1Q13501 440 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 LRRC26Q2I0M4 334 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 TIGD4Q8IY51 512 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 NPRL2Q8WTW4 380 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 DDIT4LQ96D03 193 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 MYNNQ9NPC7 610 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 MYOGP15173 224 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 AMY2BP19961 511 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 UEVLDQ8IX04 471 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 OR9A4Q8NGU2 314 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 TMEM239Q8WW34 195 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 RADILQ96JH8 1075 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 SELPLGQ14242 412 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 SYPL1Q16563 259 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 DCP2Q8IU60 420 aaKnown RBP12.07□□□□□ -0.48
CHD4-211ENST00000544484 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 OR6C2Q9NZP2 312 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 UCHL1P09936 223 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 ZMYND11Q15326 602 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 DCST2Q5T1A1 773 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 DENND6BQ8NEG7 585 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 USP22Q9UPT9 525 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 RNF215Q9Y6U7 377 aa12.07□□□□□ -0.48
CHD4-211ENST00000544484 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 E2F3O00716 465 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 F11P03951 625 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 GYPBP06028 91 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 GNAO1P09471 354 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ZNF35P13682 527 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TACR1P25103 407 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 HBA1P69905 142 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ABHD17BQ5VST6 288 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 CCBE1Q6UXH8 406 aaPredicted RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 ZSCAN1Q8NBB4 408 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 HOXB13Q92826 284 aaPredicted RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 PINK1Q9BXM7 581 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 NUMBLQ9Y6R0 609 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 CAPNS1P04632 268 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ARHGAP19Q14CB8 494 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 BCL2L15Q5TBC7 163 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 KCTD11Q693B1 232 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 LRRN1Q6UXK5 716 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 SERPINA11Q86U17 422 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms