RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNF334Q9HCZ1 680 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 THSD1Q9NS62 852 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 HIF1ANQ9NWT6 349 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 TP53TG5Q9Y2B4 290 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 OR1A2Q9Y585 309 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 HSPE1-MOB4S4R3N1 261 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 FAM230AA0A1W2PPH8 454 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 SOCS5O75159 536 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 CLN5O75503 358 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 LCATP04180 440 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 SFTPDP35247 375 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 CLDN8P56748 225 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 RRAS2P62070 204 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 GPR17Q13304 367 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 WDR45BQ5MNZ6 344 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 PRR22Q8IZ63 422 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ST7LQ8TDW4 575 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZFP90Q8TF47 636 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 MYLIPQ8WY64 445 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 SAT2Q96F10 170 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZNF419Q96HQ0 510 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 A0A1B0GVG6 124 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 H3BML4 177 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 K7ERQ8 282 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 B4GAT1O43505 415 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 MT-CO2P00403 227 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 BDH1Q02338 343 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZNF33AQ06730 810 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 CDK5R2Q13319 367 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 PIN1Q13526 163 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 HHIPL1Q96JK4 782 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZNF778Q96MU6 729 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ACKR4Q9NPB9 350 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 PCDHGA7Q9Y5G6 932 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 AIPO00170 330 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 DVL2O14641 736 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 SGCEO43556 437 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZNF585AQ6P3V2 769 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 SLC6A5Q9Y345 797 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 FTCDNL1E5RQL4 147 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 KCNE1P15382 129 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 TGM4P49221 684 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 GRM7Q14831 915 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 AGAP7PQ5VUJ5 663 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 AGAP6Q5VW22 663 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 LCN8Q6JVE9 175 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 TM9SF4Q92544 642 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ZNF689Q96CS4 500 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 AGAP4Q96P64 663 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 BOCQ9BWV1 1114 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 RPH3ALQ9UNE2 315 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 NPIPA5A0A0B4J1W7 369 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 NPIPA7E9PJI5 369 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 TSTD3H0UI37 97 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 SCGB1D1O95968 90 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 NPIPA8P0DM63 369 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 RNH1P13489 461 aaKnown RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 FDXRP22570 491 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 WNT4P56705 351 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 ERVPABLB-1P60509 514 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 MBTPS1Q14703 1052 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 OR52E8Q6IFG1 317 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 CMTM1Q8IZ96 169 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 STRADBQ9C0K7 418 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 C2orf78A6NCI8 922 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 ZNF736B4DX44 427 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 FRS3O43559 492 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 EPOP01588 193 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 AKAIN1P0CW23 69 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 OTX2P32243 289 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 HTR6P50406 440 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 GPR50Q13585 617 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.071e-7■■■□□ 15.8
CHD4-210ENST00000544040 KLHDC8AQ8IYD2 350 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 IL22RA1Q8N6P7 574 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 OR14L1PQ8NHC6 308 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 GPR174Q9BXC1 333 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 NCR1O76036 304 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 M6PRP20645 277 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 PROZP22891 400 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 ARSDP51689 593 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 RGNQ15493 299 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 CDCA2Q69YH5 1023 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 OR2A12Q8NGT7 310 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 FBXO27Q8NI29 283 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 WDR92Q96MX6 357 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 LILRB3O75022 631 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 CD79AP11912 226 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 ACPPP15309 386 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 AARDQ4LEZ3 155 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 PGM2L1Q6PCE3 622 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 KBTBD6Q86V97 674 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 SHDQ96IW2 340 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 TEPSINQ96N21 525 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 UHRF1Q96T88 793 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 KAT6AQ92794 2004 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 JRKO75564 520 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 SERPINE2P07093 398 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms