RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 HS6ST1O60243 411 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 SOX30O94993 753 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 SNX4O95219 450 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 KRT75O95678 551 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 SNRPB2P08579 225 aaKnown RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 RFPL3SP0C7P2 107 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 EVI2BP34910 448 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 FUT5Q11128 374 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 HYAL4Q2M3T9 481 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 CMPK2Q5EBM0 449 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
CD9-210ENST00000543916 HEPHL1Q6MZM0 1159 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 SLC30A6Q6NXT4 461 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 OLIG3Q7RTU3 272 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 TMEM251Q8N6I4 163 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 OR4C3Q8NH37 302 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 TSPEARQ8WU66 669 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 TMEM41AQ96HV5 264 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 JSRP1Q96MG2 331 aaPredicted RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 G6PC3Q9BUM1 346 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 MRGBPQ9NV56 204 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 VAPAQ9P0L0 249 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 LEF1Q9UJU2 399 aaPredicted RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 BOKQ9UMX3 212 aaPredicted RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 NPIPA1Q9UND3 350 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 PCDHGB3Q9Y5G1 929 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 WIF1Q9Y5W5 379 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 NPIPA5A0A0B4J1W7 369 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 B4DXG7 233 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 NPIPA7E9PJI5 369 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 FBP2O00757 339 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 GNB5O14775 395 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ANGPT2O15123 496 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 UNC5CO95185 931 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
CD9-210ENST00000543916 CBX6O95503 412 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 OXSR1O95747 527 aaPredicted RBP13.79□□□□□ -0.2
CD9-210ENST00000543916 NPIPA8P0DM63 369 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ETFAP13804 333 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 EDN3P14138 238 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 MAGEA5P43359 124 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 MASP1P48740 699 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 PPIAP62937 165 aaKnown RBP13.79□□□□□ -0.2
CD9-210ENST00000543916 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
CD9-210ENST00000543916 ARHGAP11BQ3KRB8 267 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 APOOLQ6UXV4 268 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 SLC22A16Q86VW1 577 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 XAGE5Q8WWM1 108 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 GPR137Q96N19 417 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 SDF2Q99470 211 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ZNF703Q9H7S9 590 aaPredicted RBP13.79□□□□□ -0.2
CD9-210ENST00000543916 ZDHHC11Q9H8X9 412 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 EXD2Q9NVH0 621 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ABCG2Q9UNQ0 655 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 NDUFAF1Q9Y375 327 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 CAPN7Q9Y6W3 813 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
CD9-210ENST00000543916 ACOT7O00154 380 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 CLIC1O00299 241 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 SNPHO15079 494 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 CCDC22O60826 627 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
CD9-210ENST00000543916 AGR2O95994 175 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 AK1P00568 194 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 NGFRP08138 427 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 CELA3AP09093 270 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 ATP6V1C1P21283 382 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 TBXA2RP21731 343 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 ADSLP30566 484 aaPredicted RBP13.78□□□□□ -0.2
CD9-210ENST00000543916 LCN1P31025 176 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 UQCRFS1P47985 274 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 C16orf62Q7Z3J2 963 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 PIGWQ7Z7B1 504 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 MTDHQ86UE4 582 aaKnown RBP13.78□□□□□ -0.2
CD9-210ENST00000543916 SNX32Q86XE0 403 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 FAM109AQ8N4B1 249 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 DPP10Q8N608 796 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 WDSUB1Q8N9V3 476 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 GALNT11Q8NCW6 608 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 ST6GALNAC3Q8NDV1 305 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 OR1J4Q8NGS1 313 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 GNRHR2Q96P88 292 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 CCDC106Q9BWC9 280 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 DEFB127Q9H1M4 99 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 SEC14L3Q9UDX4 400 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 ADAM21Q9UKJ8 722 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 C15orf41Q9Y2V0 281 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 LIPGQ9Y5X9 500 aa13.78□□□□□ -0.2
CD9-210ENST00000543916 NPIPB9F8W1W9 429 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 J3QKU1 62 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 SLC22A2O15244 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms