RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 RACK1P63244 317 aaKnown RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 CHAF1BQ13112 559 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 NDUFAF5Q5TEU4 345 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 CREB3L2Q70SY1 520 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM184CQ9NVA4 438 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 ACP2P11117 423 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 RAB33AQ14088 237 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 PCGF3Q3KNV8 242 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 KCTD18Q6PI47 426 aaPredicted RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 SPHK2Q9NRA0 654 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 RXFP3Q9NSD7 469 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 KCNN3Q9UGI6 736 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TRAPPC13A5PLN9 417 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 PPM1BO75688 479 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TIMP1P01033 207 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 SFTPBP07988 381 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 MTHFD2P13995 350 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 ACTBP60709 375 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 ACTG1P63261 375 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 DECR1Q16698 335 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 RNASE10Q5GAN6 216 aaKnown RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 FYTTD1Q96QD9 318 aaKnown RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 MBOAT4Q96T53 435 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 DUSP21Q9H596 190 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 LTB4R2Q9NPC1 389 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 GFRA2O00451 464 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TGM5O43548 720 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 MT-ND4P03905 459 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 MMP12P39900 470 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM173Q86WV6 379 aaPredicted RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 LRRC25Q8N386 305 aaPredicted RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 DPH1Q9BZG8 443 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 ACTL8Q9H568 366 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 SYNPO2LQ9H987 977 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 SEC61A2Q9H9S3 476 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 TRAV18A0A075B6X5 111 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 AMY2AP04746 511 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SPARCP09486 303 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 CD34P28906 385 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 PLK5Q496M5 336 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SNIP1Q8TAD8 396 aaKnown RBP18.28■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM163Q8TC26 289 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SLC6A16Q9GZN6 736 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 DMRT3Q9NQL9 472 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 A8MUA0 341 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 GABRPO00591 440 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 CACNG3O60359 315 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 B4GALT2O60909 372 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 HCKP08631 526 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 ITGA5P08648 1049 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 HYAL2Q12891 473 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 PNO1Q9NRX1 252 aaKnown RBP18.28■□□□□ 0.52
SUDS3-204ENST00000543473 BABAM2Q9NXR7 383 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SDK1Q7Z5N4 2213 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 MBTPS1Q14703 1052 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 TP53I3Q53FA7 332 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 HACD4Q5VWC8 232 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 LNX2Q8N448 690 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 OR4F15Q8NGB8 312 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SGTBQ96EQ0 304 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 PRRC1Q96M27 445 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 DPH7Q9BTV6 452 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 RBM38Q9H0Z9 239 aaKnown RBP18.28■□□□□ 0.52
SUDS3-204ENST00000543473 ZDHHC4Q9NPG8 344 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 DHDHQ9UQ10 334 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SLC43A1O75387 559 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 NCR1O76036 304 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 DDCP20711 480 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 BMPR1AP36894 532 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 AQP6Q13520 282 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 ITPRIPL2Q3MIP1 535 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM35AQ53FP2 167 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 XKR7Q5GH72 579 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 LRRC69Q6ZNQ3 347 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 SERPINA12Q8IW75 414 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 OR8J2Q8NGG1 315 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 METTL17Q9H7H0 456 aaPredicted RBP18.28■□□□□ 0.52
SUDS3-204ENST00000543473 MTHFD2LQ9H903 347 aaPredicted RBP18.28■□□□□ 0.52
SUDS3-204ENST00000543473 HSFX1Q9UBD0 423 aa18.28■□□□□ 0.52
SUDS3-204ENST00000543473 FXYD1O00168 92 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 CSTAP01040 98 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TRAPPC2P0DI81 140 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TRAPPC2BP0DI82 140 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 GABRA5P31644 462 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 RGS19P49795 217 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 DLX5P56178 289 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 PAPPAQ13219 1627 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 OCLNQ16625 522 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 DEFB134Q4QY38 66 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 FAM122CQ6P4D5 195 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 IL20RBQ6UXL0 311 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TRIM46Q7Z4K8 759 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 OR5D16Q8NGK9 328 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 DHRS1Q96LJ7 313 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 ABCG4Q9H172 646 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 GALNT9Q9HCQ5 603 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 MYNNQ9NPC7 610 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 SOWAHCQ53LP3 525 aaPredicted RBP18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM185AQ8NFB2 350 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms