RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CAMKVQ8NCB2 501 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 ZG16BQ96DA0 208 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 TMCO6Q96DC7 493 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 MRPL38Q96DV4 380 aaKnown RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 SIPA1Q96FS4 1042 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 SLC41A3Q96GZ6 507 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 FAM46AQ96IP4 442 aaKnown RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 OR2A14Q96R47 310 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 MCHR1Q99705 422 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 JAM3Q9BX67 310 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 KRCC1Q9NPI7 259 aaPredicted RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 TXNL4BQ9NX01 149 aaKnown RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 DCAF16Q9NXF7 216 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 PILRAQ9UKJ1 303 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 SATB2Q9UPW6 733 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 WDR45Q9Y484 360 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 SLC22A7Q9Y694 548 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 CDH10Q9Y6N8 788 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 V9GYH0 126 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 FAM221BA6H8Z2 402 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SCAMP1O15126 338 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SURF4O15260 269 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 P2RX6O15547 441 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FRS3O43559 492 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 KLF8O95600 359 aaPredicted RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 DLGAP3O95886 979 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 APOA1P02647 267 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CPMP14384 443 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 UGT2B7P16662 529 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 MAGP20916 626 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 HNRNPA2B1P22626 353 aaKnown RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 GABRA5P31644 462 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 PBX2P40425 430 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ACTR1BP42025 376 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 AVPR1BP47901 424 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CLDN2P57739 230 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ACTR1AP61163 376 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 EEF1A1P68104 462 aaKnown RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ACSM1Q08AH1 577 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 PGGHGQ32M88 737 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FLYWCH1Q4VC44 716 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF628Q5EBL2 1059 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 PRRT3Q5FWE3 981 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 AADACL4Q5VUY2 407 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CD200R1LQ6Q8B3 271 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF836Q6ZNA1 936 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 QSOX2Q6ZRP7 698 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 GDF7Q7Z4P5 450 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF485Q8NCK3 441 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SLC16A11Q8NCK7 471 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 HTRA1Q92743 480 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 UFD1Q92890 307 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CDS1Q92903 461 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 MSLNLQ96KJ4 702 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 BMFQ96LC9 184 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 RIPOR3Q96MK2 946 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FCRL4Q96PJ5 515 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 COQ7Q99807 217 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 KCNS3Q9BQ31 491 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF350Q9GZX5 532 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 PIGUQ9H490 435 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 C6orf106Q9H6K1 298 aaPredicted RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ANKRA2Q9H9E1 313 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 NLGN3Q9NZ94 848 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CNIH4Q9P003 139 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF232Q9UNY5 417 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 C19orf53Q9UNZ5 99 aaPredicted RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SF3B6Q9Y3B4 125 aaKnown RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SPIN1Q9Y657 262 aaPredicted RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 LRP4O75096 1905 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 A0A087WV62 115 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 TMEM221A6NGB7 291 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 EPOPA6NHQ4 379 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SLC30A4O14863 429 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FCMRO60667 390 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CTSVO60911 334 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 AK1P00568 194 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 THY1P04216 161 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 HMGN1P05114 100 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 TSPAN19P0C672 248 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 LIMS3P0CW19 117 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 LIMS4P0CW20 117 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FGF9P31371 208 aaPredicted RBP6.11□□□□□ -1.43
PTPRO-208ENST00000542557 YPEL5P62699 121 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 CD300CQ08708 224 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 DUSP5Q16690 384 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 MANEAQ5SRI9 462 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FHL5Q5TD97 284 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 NXNL2Q5VZ03 156 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 FCRL6Q6DN72 434 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 ZCCHC12Q6PEW1 402 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 TMPRSS11AQ6ZMR5 421 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 NKAIN4Q8IVV8 208 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 NRMQ8IXM6 262 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 OR4Q3Q8NH05 313 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 TM9SF4Q92544 642 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 SLC9A6Q92581 669 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 HPS1Q92902 700 aa6.11□□□□□ -1.43
PTPRO-208ENST00000542557 KCTD7Q96MP8 289 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms