RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SLC32A1Q9H598 525 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ELOVL6Q9H5J4 265 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 IKZF5Q9H5V7 419 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 MCUBQ9NWR8 336 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 NPFFR2Q9Y5X5 522 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 CKAP5Q14008 2032 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 TP53BP1Q12888 1972 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ARHGEF33A8MVX0 844 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 LOC730098B7Z3J9 87 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 QSOX1O00391 747 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 MANBAO00462 879 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ABCD4O14678 606 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 EFSO43281 561 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PTHP01270 115 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF888P0CJ79 500 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 GALP22466 123 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 AHCYP23526 432 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 IDH2P48735 452 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 TAS2R38P59533 333 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PFN3P60673 137 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ACTR1AP61163 376 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ERVK-25P63136 954 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 CNTN1Q12860 1018 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PUM1Q14671 1186 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 CCDC85BQ15834 202 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 TSTQ16762 297 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PYDC2Q56P42 97 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 LAMTOR1Q6IAA8 161 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 CAPN13Q6MZZ7 669 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 JMJD6Q6NYC1 403 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF547Q8IVP9 402 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 NLGN4YQ8NFZ3 816 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 NETO1Q8TDF5 533 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 FCGR1BQ92637 280 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PPP1R16AQ96I34 528 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 OR1F2PQ96R84 312 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PFDN5Q99471 154 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PTDSS2Q9BVG9 487 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 SF3B5Q9BWJ5 86 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 MRPL37Q9BZE1 423 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 TTYH1Q9H313 450 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ZCCHC4Q9H5U6 513 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 IL1RAPQ9NPH3 570 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 GLS2Q9UI32 602 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 BTNL2Q9UIR0 455 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF490Q9ULM2 529 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 PCYT1BQ9Y5K3 369 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
PDLIM5-221ENST00000542407 A0A0U1RQV5 110 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SMIM30A4D0T7 59 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 NSA2O95478 260 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 DIRAS3O95661 229 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 C1QBP02746 253 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 EPHX1P07099 455 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 OR4E1P0C645 316 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 G6PDP11413 515 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 KIR2DL3P43628 341 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ILF3Q12906 894 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 KIAA0040Q15053 153 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR19Q15760 415 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 RFTN2Q52LD8 501 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 KLHL12Q53G59 568 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 COX20Q5RI15 118 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 AGBL4Q5VU57 503 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC16A13Q7RTY0 426 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 FAM122BQ7Z309 247 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 GALNT10Q86SR1 603 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 TCTE3Q8IZS6 198 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 L3MBTL4Q8NA19 623 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SUSD6Q92537 303 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 MAGEB10Q96LZ2 347 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC29A3Q9BZD2 475 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 METTL9Q9H1A3 318 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC26A1Q9H2B4 701 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ABCB9Q9NP78 766 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 PRMT8Q9NR22 394 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 MGAT4AQ9UM21 535 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ABCG2Q9UNQ0 655 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR52Q9Y2T5 361 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 UNC80Q8N2C7 3258 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 K7EQS6 105 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 FFAR3O14843 346 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR42O15529 346 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC25A17O43808 307 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 CREG1O75629 220 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 HCKP08631 526 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 TSPAN19P0C672 248 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 KIR2DL1P43626 348 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 MAP2K6P52564 334 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 TNK1Q13470 666 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 CAMK2GQ13555 558 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 PWP1Q13610 501 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 KEAP1Q14145 624 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms