RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TRBV11-1A0A0K0K1C0 115 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 A0A0U1RQS6 177 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 USP17L3A6NCW0 530 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 LRIT2A6NDA9 550 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 FAM159BA6NKW6 160 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MYO1GB0I1T2 1018 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 C9orf172C9J069 976 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MCRIP1C9JLW8 97 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF670-ZNF695F2Z2N8 137 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 F5H0A9 414 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SMLR1H3BR10 107 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 GTPBP1O00178 669 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 FOXE1O00358 373 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 NR5A2O00482 541 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PPP1R2P9O14990 202 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ARPC2O15144 300 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PMM2O15305 246 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 FLRT2O43155 660 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MED7O43513 233 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RGS14O43566 566 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RNF13O43567 381 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SSNA1O43805 119 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC37A4O43826 429 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ICOSLGO75144 302 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SH3BGRLO75368 114 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RHBDL1O75783 438 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PROSCO94903 275 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 AP2A2O94973 939 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PRAMEF12O95522 483 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TBX18O95935 607 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ONECUT2O95948 504 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 IGHA1P01876 353 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RHOP08100 348 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC35E2BP0CK96 405 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC35E2P0CK97 266 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 CPN1P15169 458 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ELNP15502 786 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MGMTP16455 207 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PGAM1P18669 254 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 EPHA8P29322 1005 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 GNRHRP30968 328 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC6A4P31645 630 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MC5RP33032 325 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TAGLN2P37802 199 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 IL15P40933 162 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MATKP42679 507 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MAP2K4P45985 399 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 OR3A1P47881 315 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PITPNBP48739 271 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MARCKSL1P49006 195 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MRPL19P49406 292 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RGS4P49798 205 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PPT1P50897 306 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 LUMP51884 338 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 CTSCP53634 463 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 VSX2P58304 361 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 OR2B8PP59922 312 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TPI1P60174 286 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RPS8P62241 208 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SELENOTP62341 195 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RANP62826 216 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 CSNK1G2P78368 415 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 IL18Q14116 193 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 HLXQ14774 488 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ODF1Q14990 250 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PCLAFQ15004 111 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 IL17AQ16552 155 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 CTU2Q2VPK5 515 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 EML3Q32P44 896 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RFTN2Q52LD8 501 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 PYCR3Q53H96 274 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 MESTQ5EB52 335 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SIRPB2Q5JXA9 342 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 FBXO47Q5MNV8 452 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 NOL9Q5SY16 702 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 OTUD3Q5T2D3 398 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TSTD2Q5T7W7 516 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 NKAIN2Q5VXU1 208 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC22A10Q63ZE4 541 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 WSCD1Q658N2 575 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 RPUSD3Q6P087 351 aaKnown RBP4.89□□□□□ -1.63
SNHG1-218ENST00000541615 AADACL2Q6P093 401 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 DENND1BQ6P3S1 775 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM88Q6PEY1 159 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC22A25Q6T423 547 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SPESP1Q6UW49 350 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 LANCL3Q6ZV70 420 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM179Q6ZVK1 233 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 ASB18Q6ZVZ8 466 aa4.89□□□□□ -1.63
SNHG1-218ENST00000541615 TECPR1Q7Z6L1 1165 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms