RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 CHP2O43745 196 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 PCCBP05166 539 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 DRD5P21918 477 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MINDY4Q4G0A6 757 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDR45BQ5MNZ6 344 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MZT2BQ6NZ67 158 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRILQ7L0X0 811 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 RRM2BQ7LG56 351 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRSS45Q7RTY3 260 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 KRT78Q8N1N4 520 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 CYB561A3Q8NBI2 242 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 C17orf47Q8NEP4 570 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRRC1Q96M27 445 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MARVELD1Q9BSK0 173 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 GON7Q9BXV9 100 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MKRN2Q9H000 416 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR52A5Q9H2C5 316 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 C11orf49Q9H6J7 331 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 ATP13A2Q9NQ11 1180 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 ENAMQ9NRM1 1142 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 SRRDQ9UH36 339 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR1A2Q9Y585 309 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDFY3Q8IZQ1 3526 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRRT4C9JH25 899 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 STK25O00506 426 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 PDE9AO76083 593 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 HRGP04196 525 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 GKN3PP0CG01 181 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ACRP10323 421 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRG2P13727 222 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 KELP23276 732 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 CERS1P27544 350 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 BTCP35070 178 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 CLCNKAP51800 687 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SREBF2Q12772 1141 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAB21L1Q13394 359 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 KLHDC8AQ8IYD2 350 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 NEUROD4Q9HD90 331 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SAGE1Q9NXZ1 904 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 KLHL21Q9UJP4 597 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 A0A1W2PR48 441 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR52A4PA6NMU1 304 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 BTN3A3O00478 584 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ERI3O43414 337 aaKnown RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ORC5O43913 435 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 PPP2R1BP30154 601 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ID2Q02363 134 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 TNK1Q13470 666 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAM92BQ6ZTR7 304 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 IKBIPQ70UQ0 350 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 KREMEN2Q8NCW0 462 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR10H4Q8NGA5 316 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SUN3Q8TAQ9 357 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 AKAP1Q92667 903 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 KCNJ15Q99712 375 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 TIMP4Q99727 224 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 THAP7Q9BT49 309 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 DPH1Q9BZG8 443 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR51V1Q9H2C8 321 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 FGF20Q9NP95 211 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC35C2Q9NQQ7 365 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLCO1C1Q9NYB5 712 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 LOC105371267A0A1B0GV96 52 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRDV1A0A1B0GX56 115 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OTOL1A6NHN0 477 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 SURF4O15260 269 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 HCN1O60741 890 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 PAPLNO95428 1278 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ALDH1A1P00352 501 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ACADMP11310 421 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 NOS3P29474 1203 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAGEB1P43366 347 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 GCGRP47871 477 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OMPP47874 163 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 PDX1P52945 283 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 FGFBP1Q14512 234 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 C9orf64Q5T6V5 341 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 AADACL4Q5VUY2 407 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 CD200R1LQ6Q8B3 271 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF322Q6U7Q0 402 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 NUDT13Q86X67 352 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 CCDC28AQ8IWP9 274 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF655Q8N720 491 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR51L1Q8NGJ5 315 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 OMA1Q96E52 524 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 COQ10AQ96MF6 247 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 DPCDQ9BVM2 203 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 C20orf141Q9NUB4 165 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 CBLCQ9ULV8 474 aa9.69□□□□□ -0.86
CDC42SE1-207ENST00000540998 A0A1W2PPV9 198 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 DNAJB6O75190 326 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 MOSPD3O75425 235 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 MT-ND4P03905 459 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms