RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TMEM154Q6P9G4 183 aa22.73■■□□□ 1.23
TTC3-225ENST00000540756 FAM199XQ6PEV8 388 aaPredicted RBP22.73■■□□□ 1.23
TTC3-225ENST00000540756 NIPSNAP1Q9BPW8 284 aa22.73■■□□□ 1.23
TTC3-225ENST00000540756 SEMA4GQ9NTN9 838 aa22.73■■□□□ 1.23
TTC3-225ENST00000540756 FREM2Q5SZK8 3169 aa22.73■■□□□ 1.23
TTC3-225ENST00000540756 C4orf47A7E2U8 309 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 IDSB3KWA1 339 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 NTN1O95631 604 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 POU2F1P14859 743 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 LSM11P83369 360 aaKnown RBP eCLIP22.72■■□□□ 1.232e-18■■■□□ 16.7
TTC3-225ENST00000540756 PLAURQ03405 335 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 TCF15Q12870 199 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 FGD3Q5JSP0 725 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 KRT80Q6KB66 452 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 RBM44Q6ZP01 1051 aaKnown RBP22.72■■□□□ 1.23
TTC3-225ENST00000540756 OVCH1Q7RTY7 1134 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 PLPP5Q8NEB5 264 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 RIBC2Q9H4K1 309 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 PARD6AQ9NPB6 346 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 TMEM9BQ9NQ34 198 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 C3orf18Q9UK00 162 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 IFT52Q9Y366 437 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 PCNX2A6NKB5 2137 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 DMXL1Q9Y485 3027 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 ELAVL4P26378 380 aaKnown RBP22.72■■□□□ 1.23
TTC3-225ENST00000540756 MC2RQ01718 297 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 LARS2Q15031 903 aaKnown RBP22.72■■□□□ 1.23
TTC3-225ENST00000540756 FLYWCH1Q4VC44 716 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 PIK3C3Q8NEB9 887 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 OR7G1Q8NGA0 311 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 DHRS1Q96LJ7 313 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 RDH12Q96NR8 316 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 KRT84Q9NSB2 600 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 MAN2C1Q9NTJ4 1040 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 SLC13A4Q9UKG4 626 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 ZNF232Q9UNY5 417 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 PCDHGA8Q9Y5G5 932 aa22.72■■□□□ 1.23
TTC3-225ENST00000540756 H0YAE9 185 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 AK1P00568 194 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 H1F0P07305 194 aaKnown RBP22.71■■□□□ 1.23
TTC3-225ENST00000540756 BLMHQ13867 455 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 MRPL2Q5T653 305 aaKnown RBP22.71■■□□□ 1.23
TTC3-225ENST00000540756 BCORP1Q8N888 145 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 NRSN2Q9GZP1 204 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 Q9N2J8 555 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 CBLCQ9ULV8 474 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 OR10H1Q9Y4A9 318 aa22.71■■□□□ 1.23
TTC3-225ENST00000540756 CPSF4LA6NMK7 179 aaKnown RBP22.7■■□□□ 1.23
TTC3-225ENST00000540756 GKN3PP0CG01 181 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 PRG2P13727 222 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 PDZK1Q5T2W1 519 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 TAGAPQ8N103 731 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 SLC7A13Q8TCU3 470 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 NXF5Q9H1B4 397 aaKnown RBP22.7■■□□□ 1.23
TTC3-225ENST00000540756 PRODH2Q9UF12 536 aa22.7■■□□□ 1.23
TTC3-225ENST00000540756 CPNE3O75131 537 aaKnown RBP22.7■■□□□ 1.22
TTC3-225ENST00000540756 DBIP07108 87 aaKnown RBP22.7■■□□□ 1.22
TTC3-225ENST00000540756 HEXBP07686 556 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 THBS1P07996 1170 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 HBQ1P09105 142 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 ETV5P41161 510 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 RAD23AP54725 363 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 ZNF770Q6IQ21 691 aaPredicted RBP22.7■■□□□ 1.22
TTC3-225ENST00000540756 C9orf40Q8IXQ3 194 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 ZNF614Q8N883 585 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 SPSB2Q99619 263 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 FUZQ9BT04 418 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 FBXO8Q9NRD0 319 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 SLC39A1Q9NY26 324 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 ORC6Q9Y5N6 252 aa22.7■■□□□ 1.22
TTC3-225ENST00000540756 LOC100130705A0A1B0GUX0 176 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 CDC14CA4D256 554 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 VSTM2BA6NLU5 285 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 CCNB2O95067 398 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 ONECUT2O95948 504 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 GASTP01350 101 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 NID1P14543 1247 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 RGS8P57771 180 aaPredicted RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 INSM1Q01101 510 aaPredicted RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 Q6ZPB1 254 aaPredicted RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 BPHLQ86WA6 291 aaPredicted RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 PRSS33Q8NF86 280 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 GTPBP3Q969Y2 492 aaKnown RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 EFHD2Q96C19 240 aaPredicted RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 PRRC1Q96M27 445 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 GAL3ST4Q96RP7 486 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 PHOX2BQ99453 314 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 FNDC11Q9BVV2 318 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 DYRK3O43781 588 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 CCKBRP32239 447 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 CLK3P49761 638 aaKnown RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 AQP11Q8NBQ7 271 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 DAZLQ92904 295 aaKnown RBP22.69■■□□□ 1.22
TTC3-225ENST00000540756 ADIPOR1Q96A54 375 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 ULBP3Q9BZM4 244 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 FAM86C1Q9NVL1 165 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 KLHL28Q9NXS3 571 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 FLRT3Q9NZU0 649 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 B3GALT1Q9Y5Z6 326 aa22.69■■□□□ 1.22
TTC3-225ENST00000540756 CDHR4A6H8M9 788 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms