RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 KAT7O95251 611 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 LGI1O95970 557 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 CPN2P22792 545 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 ATP5A1P25705 553 aaKnown RBP13.21□□□□□ -0.29
INO80E-203ENST00000540562 RAB28P51157 221 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 CDC73Q6P1J9 531 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 ESPNLQ6ZVH7 1005 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 MTSS1LQ765P7 747 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 OR5T3Q8NGG3 340 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 QRFPRQ96P65 431 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 SLC38A1Q9H2H9 487 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 GRIP1Q9Y3R0 1128 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 A0A1W2PQU0 124 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 PLA2G10O15496 165 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 AKR7A2O43488 359 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 FCER2P06734 321 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 SYPP08247 313 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 SLC1A3P43003 542 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 E2F2Q14209 437 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 EXOSC7Q15024 291 aaKnown RBP13.21□□□□□ -0.29
INO80E-203ENST00000540562 KIAA0907Q7Z7F0 614 aaPredicted RBP13.21□□□□□ -0.29
INO80E-203ENST00000540562 FBXO15Q8NCQ5 510 aaPredicted RBP13.21□□□□□ -0.29
INO80E-203ENST00000540562 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 FGF22Q9HCT0 170 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 HINT3Q9NQE9 182 aaKnown RBP13.21□□□□□ -0.29
INO80E-203ENST00000540562 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 FAM47E-STBD1D6RA91 191 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 THY1P04216 161 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.3
INO80E-203ENST00000540562 CSNK2A2P19784 350 aaPredicted RBP13.21□□□□□ -0.3
INO80E-203ENST00000540562 ARHGEF6Q15052 776 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 CST6Q15828 149 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 GAB4Q2WGN9 574 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 PLET1Q6UQ28 207 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 LYPD8Q6UX82 237 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 SLC36A4Q6YBV0 504 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 LINC00299Q6ZSB3 139 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 CADM2Q8N3J6 435 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 FLCNQ8NFG4 579 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 EPHX3Q9H6B9 360 aa13.21□□□□□ -0.3
INO80E-203ENST00000540562 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.3
INO80E-203ENST00000540562 C12orf71A8MTZ7 269 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 B4DXG7 233 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 CHRNB1P11230 501 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 PEBP1P30086 187 aaKnown RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 SRP9P49458 86 aaKnown RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 TATDN3Q17R31 274 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 OTPQ5XKR4 325 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 ARL14Q8N4G2 192 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 TMEM163Q8TC26 289 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 LCN9Q8WX39 176 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 SLC35A4Q96G79 324 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 PLA2G2FQ9BZM2 168 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 PPIL3Q9H2H8 161 aaKnown RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 GALNT9Q9HCQ5 603 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 A0A0X1KG70 313 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 E9PI62 339 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 HOXC11O43248 304 aaPredicted RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 PRODHO43272 600 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 NFATC1O95644 943 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 RPN2P04844 631 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 CA3P07451 260 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 GJA4P35212 333 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
INO80E-203ENST00000540562 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 C19orf48Q6RUI8 117 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 OR2L3Q8NG85 312 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
INO80E-203ENST00000540562 SLC22A4Q9H015 551 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 TRPV5Q9NQA5 729 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
INO80E-203ENST00000540562 FRYLO94915 3013 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 LRRN3E7EW58 273 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 GRPRP30550 384 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MAPK9P45984 424 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 QPRTQ15274 297 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MAPK14Q16539 360 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 PIGXQ8TBF5 258 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 GCDHQ92947 438 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 PHF21AQ96BD5 680 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms