RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 BAIAP2L1Q9UHR4 511 aa19■□□□□ 0.63
CHFR-217ENST00000540537 RPH3AQ9Y2J0 694 aaPredicted RBP19■□□□□ 0.63
CHFR-217ENST00000540537 MPDZO75970 2070 aa19■□□□□ 0.63
CHFR-217ENST00000540537 C17orf51A8MQB3 221 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 RCBTB2O95199 551 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 KCNH1O95259 989 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 BCKDHAP12694 445 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 DDX5P17844 614 aaKnown RBP18.99■□□□□ 0.63
CHFR-217ENST00000540537 MAPK1P28482 360 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 GABRA3P34903 492 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 MAP3K8P41279 467 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 DGKQP52824 942 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 B3GALT5-AS1P59052 145 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 SNTB1Q13884 538 aaKnown RBP18.99■□□□□ 0.63
CHFR-217ENST00000540537 TESK1Q15569 626 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 VPS26BQ4G0F5 336 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 XKR7Q5GH72 579 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 LRIG3Q6UXM1 1119 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 ZCCHC23Q6ZST2 131 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 R3HCC1LQ7Z5L2 792 aaKnown RBP18.99■□□□□ 0.63
CHFR-217ENST00000540537 CDRT4Q8N9R6 151 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 NUP43Q8NFH3 380 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 TMEM109Q9BVC6 243 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 ACBD3Q9H3P7 528 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 PCNX3Q9H6A9 2034 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 AKAP6Q13023 2319 aa18.99■□□□□ 0.63
CHFR-217ENST00000540537 GXYLT2A0PJZ3 443 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 TMEM114B3SHH9 223 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 EEF1E1-BLOC1S5C9J1V9 151 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 EEF1E1O43324 174 aaKnown RBP18.98■□□□□ 0.63
CHFR-217ENST00000540537 HCRTR2O43614 444 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 CTAG2O75638 210 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 NKX2-2O95096 273 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 UTS2O95399 124 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 POU3F2P20265 443 aaPredicted RBP18.98■□□□□ 0.63
CHFR-217ENST00000540537 TCEA1P23193 301 aaKnown RBP18.98■□□□□ 0.63
CHFR-217ENST00000540537 RFX3P48380 749 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 AGFG1P52594 562 aaKnown RBP18.98■□□□□ 0.63
CHFR-217ENST00000540537 FLYWCH1Q4VC44 716 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 KIF18BQ86Y91 864 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 GPR151Q8TDV0 419 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 FAM222BQ8WU58 562 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 MS4A4EQ96PG1 132 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 RTN4RQ9BZR6 473 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 PTGES2Q9H7Z7 377 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 DNAJB12Q9NXW2 375 aaKnown RBP18.98■□□□□ 0.63
CHFR-217ENST00000540537 MED11Q9P086 117 aa18.98■□□□□ 0.63
CHFR-217ENST00000540537 HIVEP1P15822 2718 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 LINC01387J3KSC0 135 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 TYROBPO43914 113 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 SLU7O95391 586 aaKnown RBP18.97■□□□□ 0.63
CHFR-217ENST00000540537 IGKV1D-16P01601 117 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 BPGMP07738 259 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 PEPDP12955 493 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 CREB1P16220 341 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 HK1P19367 917 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 HPCAL1P37235 193 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 RPL3P39023 403 aaKnown RBP18.97■□□□□ 0.63
CHFR-217ENST00000540537 PRR5P85299 388 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 SORDQ00796 357 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 FOXF2Q12947 444 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 STX5Q13190 355 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 MARCH3Q86UD3 253 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 MREGQ8N565 214 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 OR6Y1Q8NGX8 325 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 PIK3R3Q92569 461 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 GIMAP5Q96F15 307 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 RMND5BQ96G75 393 aaPredicted RBP18.97■□□□□ 0.63
CHFR-217ENST00000540537 TBL1XR1Q9BZK7 514 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 ATP6V1HQ9UI12 483 aa18.97■□□□□ 0.63
CHFR-217ENST00000540537 IGLV3-32A0A0A0MS00 114 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 FAM221AA4D161 298 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 SCAMP2O15127 329 aaKnown RBP18.96■□□□□ 0.63
CHFR-217ENST00000540537 EMC8O43402 210 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 ARRB2P32121 409 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 ETV4P43268 484 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 PRKAG1P54619 331 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 EEF1A1P68104 462 aaKnown RBP18.96■□□□□ 0.63
CHFR-217ENST00000540537 C17orf67Q0P5P2 114 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 MLC1Q15049 377 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 GRAMD1BQ3KR37 738 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 GLYR1Q49A26 553 aaPredicted RBP18.96■□□□□ 0.63
CHFR-217ENST00000540537 ATP6AP1LQ52LC2 224 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 EEF1A1P5Q5VTE0 462 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 RAET1LQ5VY80 246 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 MFSD12Q6NUT3 480 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 ZCCHC12Q6PEW1 402 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 SZRD1Q7Z422 152 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 GRAMD2AQ8IUY3 354 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 GOT1L1Q8NHS2 421 aaPredicted RBP18.96■□□□□ 0.63
CHFR-217ENST00000540537 AGR3Q8TD06 166 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 DUSP19Q8WTR2 217 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 INTS12Q96CB8 462 aaKnown RBP18.96■□□□□ 0.63
CHFR-217ENST00000540537 C1GALT1C1Q96EU7 318 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 HHATLQ9HCP6 504 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 GIMAP2Q9UG22 337 aa18.96■□□□□ 0.63
CHFR-217ENST00000540537 PEX11AO75192 247 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 ANGPTL1O95841 491 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 NGFRP08138 427 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms