RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TMEM200AQ86VY9 491 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 SERPINA9Q86WD7 417 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 FRMD1Q8N878 549 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 OR13C5Q8NGS8 318 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 LINC01599Q8WXQ3 324 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 DDX31Q9H8H2 851 aaKnown RBP10.48□□□□□ -0.73
PBX1-212ENST00000540236 CDH10Q9Y6N8 788 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 ZFC3H1O60293 1989 aaKnown RBP10.48□□□□□ -0.73
PBX1-212ENST00000540236 A0A087WV62 115 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 A0A1W2PPH5 198 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 TMEM72A0PK05 275 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 MBTD1Q05BQ5 628 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 C14orf28Q4W4Y0 310 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 DDX53Q86TM3 631 aaKnown RBP10.48□□□□□ -0.73
PBX1-212ENST00000540236 SYNPRQ8TBG9 265 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 FCRL5Q96RD9 977 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 TOLLIPQ9H0E2 274 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 TCF7L1Q9HCS4 588 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 GULP1Q9UBP9 304 aa10.48□□□□□ -0.73
PBX1-212ENST00000540236 MAFO75444 373 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 UBBP0CG47 229 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 BDKRB1P46663 353 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 SEC61A1P61619 476 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 RPS27AP62979 156 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 UBA52P62987 128 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 MRPS10P82664 201 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 PIN1Q13526 163 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 MANEAQ5SRI9 462 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 LAIR2Q6ISS4 152 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 B3GNT9Q6UX72 402 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 Q6ZTK2 550 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GPRIN1Q7Z2K8 1008 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 ADGRF3Q8IZF5 1079 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 IKZF2Q9UKS7 526 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 POMT2Q9UKY4 750 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GPR37O15354 613 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PMP2P02689 132 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GNSP15586 552 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PSMB10P40306 273 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PSAPL1Q6NUJ1 521 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 OR5M1Q8NGP8 315 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GRHL3Q8TE85 626 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 S100A16Q96FQ6 103 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 SLC19A3Q9BZV2 496 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PDZD7Q9H5P4 517 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 FN3KRPQ9HA64 309 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 EXOSC1Q9Y3B2 195 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 MED19A0JLT2 244 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 IRGMA1A4Y4 181 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PCDH7O60245 1069 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 EPHX1P07099 455 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 RHOCP08134 193 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 HMGCLP35914 325 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 ACVRL1P37023 503 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GNG10P50151 68 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GPR33Q49SQ1 333 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 FAM124AQ86V42 546 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 LRRTM4Q86VH4 590 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 ATG5Q9H1Y0 275 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 NT5DC2Q9H857 520 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PDLIM7Q9NR12 457 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 WSB2Q9NYS7 404 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 M0R3H8 397 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 SCAF4O95104 1147 aaKnown RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 LPOP22079 712 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 ART1P52961 327 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 CTSCP53634 463 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 MLLT11Q13015 90 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 SLC10A6Q3KNW5 377 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 TP53I3Q53FA7 332 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 RPTNQ6XPR3 784 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 NRROSQ86YC3 692 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 OR2A12Q8NGT7 310 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 RFKQ969G6 155 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 ZNF607Q96SK3 696 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PITX2Q99697 317 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 KLHL42Q9P2K6 505 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 CHST2Q9Y4C5 530 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 SYT5O00445 386 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 SLC7A4O43246 635 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 SDHAP31040 664 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 GJA4P35212 333 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 MTNR1AP48039 350 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 DAOAP59103 153 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 COX20Q5RI15 118 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 TGIF2LXQ8IUE1 241 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 OR2L2Q8NH16 312 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 OR5W2Q8NH69 310 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 BSCL2Q96G97 398 aaPredicted RBP10.47□□□□□ -0.73
PBX1-212ENST00000540236 ANKRD19PQ9H560 264 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 ZDHHC4Q9NPG8 344 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 TRIM36Q9NQ86 728 aa10.47□□□□□ -0.73
PBX1-212ENST00000540236 FLRT2O43155 660 aa10.46□□□□□ -0.73
PBX1-212ENST00000540236 FRS3O43559 492 aa10.46□□□□□ -0.73
PBX1-212ENST00000540236 KLK1P06870 262 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms