RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 KCNK2O95069 426 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 KCNH1O95259 989 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 UTS2O95399 124 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 BMP7P18075 431 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 AGAP20933 346 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
UBE3B-212ENST00000540230 CCT3P49368 545 aaKnown RBP13.7□□□□□ -0.22
UBE3B-212ENST00000540230 PRR5P85299 388 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 STX5Q13190 355 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 TP53BP2Q13625 1128 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 SLC9B1Q4ZJI4 515 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 SPANXN4Q5MJ08 99 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 CCNJQ5T5M9 372 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 VASNQ6EMK4 673 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 SEM1Q6ZVN7 128 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 MARCH3Q86UD3 253 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 ANKRD46Q86W74 232 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 CCDC71Q8IV32 467 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-212ENST00000540230 ULK2Q8IYT8 1036 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 EID3Q8N140 333 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 JADE3Q92613 823 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 PRPF18Q99633 342 aaKnown RBP13.7□□□□□ -0.22
UBE3B-212ENST00000540230 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 OR2B2Q9GZK3 357 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 AIG1Q9NVV5 245 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 GPATCH2Q9NW75 528 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 KCNE3Q9Y6H6 103 aa13.7□□□□□ -0.22
UBE3B-212ENST00000540230 TTC36A6NLP5 189 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 KLF11O14901 512 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CFLARO15519 480 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 WDR1O75083 606 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CLDN14O95500 239 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ALOX5P09917 674 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 GLI4P10075 376 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 HTR1EP28566 365 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 IL12AP29459 219 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SOAT1P35610 550 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ADH7P40394 386 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 UFM1P61960 85 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 VPS26BQ4G0F5 336 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 NHSL2Q5HYW2 709 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 C1orf185Q5T7R7 199 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 B3GNT6Q6ZMB0 384 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 HDXQ7Z353 690 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 TRIM42Q8IWZ5 723 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 LRRC34Q8IZ02 419 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 NATD1Q8N6N6 113 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR8J2Q8NGG1 315 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR4C3Q8NH37 302 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CDS1Q92903 461 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 MARK4Q96L34 752 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SERHL2Q9H4I8 314 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 NEUROD4Q9HD90 331 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 FAM120CQ9NX05 1096 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PPP4R1LQ9P1A2 415 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ABCG2Q9UNQ0 655 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 KLF2Q9Y5W3 355 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CACNA1DQ01668 2161 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 C1QCP02747 245 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SRD5A2P31213 254 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PRIM2P49643 509 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PSMD4P55036 377 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 RPS26P62854 115 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ZNF630Q2M218 657 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 LSM12Q3MHD2 195 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SPDYE7PQ495Y7 208 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 TMEM211Q6ICI0 200 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CDC73Q6P1J9 531 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 COX18Q8N8Q8 333 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR2M3Q8NG83 312 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR5D16Q8NGK9 328 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PIWIL2Q8TC59 973 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SFXN5Q8TD22 340 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 RND1Q92730 232 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 TESCQ96BS2 214 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 WDYHV1Q96HA8 205 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PRDM14Q9GZV8 571 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 DSN1Q9H410 356 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 PIGUQ9H490 435 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 SLCO1B3Q9NPD5 702 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 ARGLU1Q9NWB6 273 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 TAS2R10Q9NYW0 307 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 MED11Q9P086 117 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 MRTO4Q9UKD2 239 aaKnown RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 RPH3AQ9Y2J0 694 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-212ENST00000540230 GPR45Q9Y5Y3 372 aa13.69□□□□□ -0.22
UBE3B-212ENST00000540230 CENPEQ02224 2701 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 A0A0G2JNJ9 132 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
UBE3B-212ENST00000540230 RNASET2O00584 256 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms