RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PAPD4Q6PIY7 484 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 DHRS4L2Q6PKH6 230 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TMEM205Q6UW68 189 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF517Q6ZMY9 492 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF836Q6ZNA1 936 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 CPEB2Q7Z5Q1 589 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 PEX5LQ8IYB4 626 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PRR22Q8IZ63 422 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF614Q8N883 585 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 BCORP1Q8N888 145 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 MORN4Q8NDC4 146 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 NFAM1Q8NET5 270 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 OR6T1Q8NGN1 323 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 OR52J3Q8NH60 311 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 OR5K1Q8NHB7 308 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 WDR36Q8NI36 951 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 MAGEE2Q8TD90 523 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 EFHD2Q96C19 240 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 SDCCAG3Q96C92 435 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PIP5K1AQ99755 562 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 WDR77Q9BQA1 342 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 PINK1Q9BXM7 581 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 WWTR1Q9GZV5 400 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SAP130Q9H0E3 1048 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TRIM45Q9H8W5 580 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 REEP1Q9H902 201 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 LIN28AQ9H9Z2 209 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 SMURF2Q9HAU4 748 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 CACYBPQ9HB71 228 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 CTPS2Q9NRF8 586 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SLC13A4Q9UKG4 626 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 CNOT11Q9UKZ1 510 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 PADI1Q9ULC6 663 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SLC9A8Q9Y2E8 581 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SAMHD1Q9Y3Z3 626 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 FAM32AQ9Y421 112 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 SCN2AQ99250 2005 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SYNDIG1LA6NDD5 238 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TTC36A6NLP5 189 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PROB1E7EW31 1015 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TNFRSF11BO00300 401 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 FFAR1O14842 300 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 BCAS1O75363 584 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 UGT2B17O75795 530 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 DNAJB5O75953 348 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 DKK1O94907 266 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 DBIP07108 87 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 CCNYL3P0C7X3 344 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 FPR1P21462 350 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 RPS4Y1P22090 263 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 DNAJA1P31689 397 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 PPICP45877 212 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 GPR143P51810 404 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 NR0B1P51843 470 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 RPS18P62269 152 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 EEF1A1P68104 462 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 LARS2Q15031 903 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 NPTX1Q15818 432 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 LIN52Q52LA3 116 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PDZK1Q5T2W1 519 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 C6orf52Q5T4I8 152 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TCTN3Q6NUS6 607 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 SHQ1Q6PI26 577 aaKnown RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 SLC29A4Q7RTT9 530 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 TSPYL5Q86VY4 417 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 SVOPLQ8N434 492 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PACRGLQ8N7B6 248 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 APCDD1LQ8NCL9 501 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 B3GNT7Q8NFL0 401 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 CT55Q8WUE5 264 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ADIPOR1Q96A54 375 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ARSGQ96EG1 525 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 LCORQ96JN0 433 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF597Q96LX8 424 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF570Q96NI8 536 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF347Q96SE7 839 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 LPAR4Q99677 370 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 ARHGDIGQ99819 225 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 G6PC3Q9BUM1 346 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PRR14Q9BWN1 585 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 POLE3Q9NRF9 147 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PDP1Q9P0J1 537 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 C19orf25Q9UFG5 118 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF223Q9UK11 482 aaPredicted RBP6.38□□□□□ -1.39
CDH19-203ENST00000540086 ZNF232Q9UNY5 417 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 CFL2Q9Y281 166 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 IFT52Q9Y366 437 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 PCDHGA3Q9Y5H0 932 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 LYVE1Q9Y5Y7 322 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 GVINP1Q7Z2Y8 2422 aa6.38□□□□□ -1.39
CDH19-203ENST00000540086 FER1L5A0AVI2 2057 aa6.37□□□□□ -1.39
CDH19-203ENST00000540086 COL27A1Q8IZC6 1860 aaPredicted RBP6.37□□□□□ -1.39
CDH19-203ENST00000540086 RALGAPA1Q6GYQ0 2036 aa6.37□□□□□ -1.39
CDH19-203ENST00000540086 TRBV11-1A0A0K0K1C0 115 aa6.37□□□□□ -1.39
CDH19-203ENST00000540086 OR6C76A6NM76 312 aa6.37□□□□□ -1.39
CDH19-203ENST00000540086 SYT5O00445 386 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms