RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KCNH1O95259 989 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 UTS2O95399 124 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SOAT1P35610 550 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 PRIM2P49643 509 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 CLNS1AP54105 237 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 GRAMD1BQ3KR37 738 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 WIPI1Q5MNZ9 446 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 CCNJQ5T5M9 372 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 CDC73Q6P1J9 531 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 YRDCQ86U90 279 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 PLCZ1Q86YW0 608 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 FAM83FQ8NEG4 500 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 OR56A1Q8NGH5 318 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 OR4A15Q8NGL6 344 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 JADE3Q92613 823 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 CDS1Q92903 461 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 VKORC1Q9BQB6 163 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 ACTRT3Q9BYD9 372 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SERHL2Q9H4I8 314 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SUCOQ9UBS9 1254 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 ACAD8Q9UKU7 415 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SLC6A5Q9Y345 797 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 BCKDKO14874 412 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 CBR3O75828 277 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 CPSF4O95639 269 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 C1QCP02747 245 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 S100A3P33764 101 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 ZFP36L2P47974 494 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 RPS26P62854 115 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 TOMM20Q15388 145 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 CDSNQ15517 529 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 MARCH3Q86UD3 253 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 COX18Q8N8Q8 333 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 OR4C3Q8NH37 302 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 STACQ99469 402 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 EBF4Q9BQW3 602 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 TP63Q9H3D4 680 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 PIGUQ9H490 435 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 DUSP22Q9NRW4 184 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 FAM120CQ9NX05 1096 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 MRTO4Q9UKD2 239 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 ABCG2Q9UNQ0 655 aa16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 NCOA6Q14686 2063 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-203ENST00000540017 GP1BBP13224 206 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 COL8A1P27658 744 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 IDH3AP50213 366 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 PSMD4P55036 377 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 POU6F2P78424 691 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 CRYZQ08257 329 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 DPY19L1Q2PZI1 675 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 PDCD4Q53EL6 469 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 ANXA8L1Q5VT79 327 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 RTL6Q6ICC9 239 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 MTFR2Q6P444 385 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 C6orf120Q7Z4R8 191 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 MRGPRGQ86SM5 289 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 OR5D16Q8NGK9 328 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 MOAP1Q96BY2 351 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 SARAFQ96BY9 339 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 MAGEB18Q96M61 343 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 BTBD2Q9BX70 525 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 GIN1Q9NXP7 522 aa16.65■□□□□ 0.26
SNRPA1-203ENST00000540017 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 C15orf38-AP3S2A0A0A6YYH1 394 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 CYSRT1A8MQ03 144 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 UBDO15205 165 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 IDO1P14902 403 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 CASP9P55211 416 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 STX5Q13190 355 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 DCST1Q5T197 706 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 ZNF585AQ6P3V2 769 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 MAMDC2Q7Z304 686 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 FADS6Q8N9I5 356 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 OR2M3Q8NG83 312 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 DUSP19Q8WTR2 217 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 PHF10Q8WUB8 498 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 CCDC115Q96NT0 180 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 OR7D2Q96RA2 312 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 TIMP4Q99727 224 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 INPP5KQ9BT40 448 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 OR2B2Q9GZK3 357 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 DSN1Q9H410 356 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 SDR39U1Q9NRG7 319 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 MED11Q9P086 117 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 PPP4R1LQ9P1A2 415 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 PCDHGB4Q9UN71 923 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 FAF1Q9UNN5 650 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 FAM215AQ9Y5M1 114 aa16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 SPTBN1Q01082 2364 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-203ENST00000540017 PCNX1Q96RV3 2341 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 MED12Q93074 2177 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 RNF103-CHMP3A0A140T963 221 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 ZIC3O60481 467 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 TGDSO95455 350 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 OXSR1O95747 527 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 PGRP06401 933 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 BMP7P18075 431 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms