RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CHCHD4Q8N4Q1 142 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 P3H4Q92791 437 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 DLX4Q92988 240 aaPredicted RBP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 DNAJA3Q96EY1 480 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 VMP1Q96GC9 406 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 DEFB118Q96PH6 123 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 IL4I1Q96RQ9 567 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 NRTNQ99748 197 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 DESI2Q9BSY9 194 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ABCG8Q9H221 673 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 FAM124BQ9H5Z6 455 aaPredicted RBP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 HOMER3Q9NSC5 361 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ELOVL2Q9NXB9 296 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 NDUFA13Q9P0J0 144 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 TRMT6Q9UJA5 497 aaKnown RBP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 FMO6PO60774 539 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 SDC3O75056 442 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 ZNF254O75437 659 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 IGKV1-17P01599 117 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 SGSHP51688 502 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 TIMM10P62072 90 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 ELAVL3Q14576 367 aaKnown RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 EOGTQ5NDL2 527 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 BEND6Q5SZJ8 279 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 METTL11BQ5VVY1 283 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 PARGQ86W56 976 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 ANKRD49Q8WVL7 239 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 PTP4A1Q93096 173 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 TMEM45BQ96B21 275 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 TADA1Q96BN2 335 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 C11orf24Q96F05 449 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 VPS39Q96JC1 886 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 NAP1L3Q99457 506 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 CARD6Q9BX69 1037 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
CCDC7-209ENST00000539197 MIOXQ9UGB7 285 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 FAM153AQ9UHL3 310 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 GRIN2DO15399 1336 aa2.63□□□□□ -1.99
CCDC7-209ENST00000539197 MACROD2A1Z1Q3 448 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 USP27XA6NNY8 438 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 TIMP1P01033 207 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 IGFBP1P08833 259 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 GNSP15586 552 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 MAGEA4P43358 317 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 NUMBP49757 651 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 STK19P49842 368 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 CCL11P51671 97 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 CNN1P51911 297 aaKnown RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 CASP9P55211 416 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 RPL32P62910 135 aaKnown RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 GFPT1Q06210 699 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 RAB35Q15286 201 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 DCST2Q5T1A1 773 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 UFSP1Q6NVU6 142 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 P4HA3Q7Z4N8 544 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 ANKRD23Q86SG2 305 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 UNC45BQ8IWX7 931 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 PEX5LQ8IYB4 626 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 ZBTB44Q8NCP5 570 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 TEX13AQ9BXU3 409 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 DCAF13Q9NV06 445 aaKnown RBP2.62□□□□□ -1.99
CCDC7-209ENST00000539197 KLHDC2Q9Y2U9 406 aa2.62□□□□□ -1.99
CCDC7-209ENST00000539197 TLR4O00206 839 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 BBOX1O75936 387 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 ANP32DO95626 131 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 RFC2P35250 354 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 COPB2P35606 906 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 PAX5Q02548 391 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 UBXN1Q04323 297 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 SRYQ05066 204 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 PKN2Q16513 984 aaKnown RBP2.61□□□□□ -1.99
CCDC7-209ENST00000539197 PARP6Q2NL67 630 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 OR2B11Q5JQS5 317 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 YRDCQ86U90 279 aaKnown RBP2.61□□□□□ -1.99
CCDC7-209ENST00000539197 TMEM61Q8N0U2 210 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 LRRC17Q8N6Y2 441 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 PHYHIPQ92561 330 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 ZNF560Q96MR9 790 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 SMIM14Q96QK8 99 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 CHRDL1Q9BU40 450 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 RBM28Q9NW13 759 aaKnown RBP2.61□□□□□ -1.99
CCDC7-209ENST00000539197 DUS2Q9NX74 493 aaKnown RBP2.61□□□□□ -1.99
CCDC7-209ENST00000539197 CWC25Q9NXE8 425 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-209ENST00000539197 FZR1Q9UM11 496 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 RLFQ13129 1914 aa2.61□□□□□ -1.99
CCDC7-209ENST00000539197 USP6P35125 1406 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 SLIT3O75094 1523 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 TRBV2A0A0J9YWF9 115 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 TRAF3IP2O43734 574 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 TBL1XO60907 577 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 LYPLA1O75608 230 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 GOSR1O95249 250 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 HNRNPFP52597 415 aaKnown RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 KRT83P78385 493 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 ZKSCAN8Q15776 578 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 DLEU7Q6UYE1 221 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 GOLGA7Q7Z5G4 137 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms