RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 INTS11Q5TA45 600 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 KANK2Q63ZY3 851 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 NANOGP8Q6NSW7 305 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 OR52N2Q8NGI0 321 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 B4GALNT2Q8NHY0 566 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 PHF12Q96QT6 1004 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 SH3GL2Q99962 352 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 NANOGQ9H9S0 305 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CXorf21Q9HAI6 301 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 OLAHQ9NV23 265 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 NXT1Q9UKK6 140 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 SLC22A7Q9Y694 548 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CAPN14A8MX76 684 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 H0YC42 278 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CLOCKO15516 846 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 ASNA1O43681 348 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 STX11O75558 287 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 IFNA14P01570 189 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 DRD2P14416 443 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 TEAD1P28347 426 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 RRM2P31350 389 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 STAT5AP42229 794 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CLDN8P56748 225 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 GBX1Q14549 363 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 KPNB1Q14974 876 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 PRR30Q53SZ7 412 aaPredicted RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 ZNF468Q5VIY5 522 aaPredicted RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 CCDC71Q8IV32 467 aaPredicted RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 L3MBTL4Q8NA19 623 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 OR52E4Q8NGH9 312 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 OR5P2Q8WZ92 322 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 TRIB1Q96RU8 372 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 MARCH7Q9H992 704 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 RASSF1Q9NS23 344 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 IMPAD1Q9NX62 359 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 KLHL42Q9P2K6 505 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 FETUBQ9UGM5 382 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 KIAA1671Q9BY89 1806 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 IL12AP29459 219 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 MYBPC1Q00872 1141 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 ILF2Q12905 390 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 MYBPHQ13203 477 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 SSPNQ14714 243 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 RINLQ6ZS11 566 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 EIF3MQ7L2H7 374 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 ZNF100Q8IYN0 542 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 ZNF527Q8NB42 609 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 OR6K6Q8NGW6 343 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 MAGEE2Q8TD90 523 aaPredicted RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 ELP4Q96EB1 424 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 TBX5Q99593 518 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 NEUROD4Q9HD90 331 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 AIG1Q9NVV5 245 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 ICOSLGO75144 302 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CST1P01037 141 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 C1QAP02745 245 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 PDX1P52945 283 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 HSD17B7P56937 341 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 FOXK1P85037 733 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CRYZQ08257 329 aaKnown RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 OR7A5Q15622 319 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 GSTA3Q16772 222 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 TRMT5Q32P41 509 aaKnown RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 TBC1D25Q3MII6 688 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ATG14Q6ZNE5 492 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ANKRD37Q7Z713 158 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CYP4Z1Q86W10 505 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 KMT5CQ86Y97 462 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 TMEM102Q8N9M5 508 aaPredicted RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 TMEM178AQ8NBL3 297 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 OR56A1Q8NGH5 318 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 VOPP1Q96AW1 172 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 RAB3IPQ96QF0 476 aaPredicted RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 OR7D2Q96RA2 312 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 EMC6Q9BV81 110 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ASF1BQ9NVP2 202 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 STOML1Q9UBI4 398 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 WDFY3Q8IZQ1 3526 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CXCR6O00574 342 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 PRRG2O14669 202 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 UGT2B11O75310 529 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 UGT2B17O75795 530 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 RASAL1O95294 804 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 PRR35P0CG20 571 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CCL3P10147 92 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CALB2P22676 271 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 HOXC12P31275 282 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 MAGEA5P43359 124 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 GSK3BP49841 420 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CDKL1Q00532 357 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ILKQ13418 452 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 EIPR1Q53HC9 387 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 DCST2Q5T1A1 773 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 KRT80Q6KB66 452 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 RTL4Q6ZR62 310 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 NDUFAF7Q7L592 441 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 UBE3DQ7Z6J8 389 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 NSMAFQ92636 917 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms