RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 NFATC3Q12968 1075 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PDE7AQ13946 482 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PTGR1Q14914 329 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 ZNF750Q32MQ0 723 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 ZNF628Q5EBL2 1059 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PIGGQ5H8A4 983 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PRR31Q5SQ13 230 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 CPTPQ5TA50 214 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 C6orf163Q5TEZ5 329 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 FCRLBQ6BAA4 426 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 RPUSD3Q6P087 351 aaKnown RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 FAM111BQ6SJ93 734 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 SLC29A4Q7RTT9 530 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 GPALPP1Q8IXQ4 340 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 DND1Q8IYX4 353 aaKnown RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 BEST3Q8N1M1 668 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 ZNF843Q8N446 348 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 LIX1Q8N485 282 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 SLC15A4Q8N697 577 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 HORMAD2Q8N7B1 307 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 ZNF321PQ8N8H1 164 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 C17orf47Q8NEP4 570 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 CEP70Q8NHQ1 597 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 CDC26Q8NHZ8 85 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 SUN3Q8TAQ9 357 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 GFM2Q969S9 779 aaKnown RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 ELP4Q96EB1 424 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PPP1R36Q96LQ0 422 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 AMDHD1Q96NU7 426 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 NPAS2Q99743 824 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 SIKE1Q9BRV8 207 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 CNPPD1Q9BV87 410 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 OR10A5Q9H207 317 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 WDR55Q9H6Y2 383 aaPredicted RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 SLCO1B3Q9NPD5 702 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 ACSS1Q9NUB1 689 aaPredicted RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 CCM2LQ9NUG4 571 aaPredicted RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 ATAD3AQ9NVI7 634 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 GALNT8Q9NY28 637 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PLA2G3Q9NZ20 509 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 MAT2BQ9NZL9 334 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 SH3BP4Q9P0V3 963 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 MARCOQ9UEW3 520 aaPredicted RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 PRODH2Q9UF12 536 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 RALYQ9UKM9 306 aaKnown RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 ERVK-19Q9WJR5 959 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 USH1CQ9Y6N9 552 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 FASNP49327 2511 aaKnown RBP5.48□□□□□ -1.53
DDB1-210ENST00000538129 MYO18BQ8IUG5 2567 aa5.48□□□□□ -1.53
DDB1-210ENST00000538129 HELZ2Q9BYK8 2649 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 ZGRF1Q86YA3 2104 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 CAPN14A8MX76 684 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 TCP11X1B4DZS4 312 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 WWP2O00308 870 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 ANKRD28O15084 1053 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 SCAMP2O15127 329 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 PRKNO60260 465 aaPredicted RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 PRAMEF2O60811 474 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 EDF1O60869 148 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 ITGA10O75578 1167 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 OR2J2O76002 312 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 CLPSP04118 112 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 HRGP04196 525 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 CT62P0C5K7 136 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 LAMP1P11279 417 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 IDO1P14902 403 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 NAGAP17050 411 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 DRD5P21918 477 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 NTSP30990 170 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 SDHAP31040 664 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 FRKP42685 505 aaPredicted RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 PPICP45877 212 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 EMDP50402 254 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 SSR4P51571 173 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 NCBP2P52298 156 aaKnown RBP eCLIP5.47□□□□□ -1.53
DDB1-210ENST00000538129 AQP5P55064 265 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 MANFP55145 182 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 DCAF7P61962 342 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 PSPHP78330 225 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 IRX1P78414 480 aaPredicted RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 OC90Q02509 493 aaPredicted RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 DUSP2Q05923 314 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 TUBA3CQ13748 450 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 ZNF169Q14929 603 aaPredicted RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 KRT72Q14CN4 511 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 EBPQ15125 230 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 RPS6KA2Q15349 733 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 GSTA3Q16772 222 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 LSM12Q3MHD2 195 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 NADK2Q4G0N4 442 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 SLC9B1Q4ZJI4 515 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 TRMT12Q53H54 448 aaKnown RBP5.47□□□□□ -1.53
DDB1-210ENST00000538129 SPINK14Q6IE38 97 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 ANKRD26P1Q6NSI1 321 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 FAM180BQ6P0A1 224 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 TUBA3EQ6PEY2 450 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 OPN5Q6U736 354 aa5.47□□□□□ -1.53
DDB1-210ENST00000538129 MAVSQ7Z434 540 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms