RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CLCA1A8K7I4 914 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 FAM227AF5H4B4 570 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 SOX1O00570 391 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 B3GALT2O43825 422 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 CCNKO75909 580 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 CCNB2O95067 398 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 GASTP01350 101 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 TYRP1P17643 537 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 S100A5P33763 92 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 XKP51811 444 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ARPC4P59998 168 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 HHEXQ03014 270 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 RSBN1Q5VWQ0 802 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 NXNL2Q5VZ03 156 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 TUBA3EQ6PEY2 450 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 BHLHB9Q6PI77 547 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 SIMC1Q8NDZ2 872 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 OR7G2Q8NG99 324 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 OR5M11Q96RB7 305 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 KCNS3Q9BQ31 491 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 FUZQ9BT04 418 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 NMNAT1Q9HAN9 279 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ANKHQ9HCJ1 492 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 FAM60AQ9NP50 221 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 GIMAP4Q9NUV9 329 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF226Q9NYT6 803 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 NTMQ9P121 344 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 SEC14L3Q9UDX4 400 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 PHF11Q9UIL8 331 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 POFUT2Q9Y2G5 429 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 PCDHGA3Q9Y5H0 932 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ARRDC5A6NEK1 342 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF860A6NHJ4 632 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 A8MV72 311 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 B4DGG1 531 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 AGRPO00253 132 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 SIAH2O43255 324 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 MRPS14O60783 128 aaKnown RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 EIF2S1P05198 315 aaKnown RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 POU2F1P14859 743 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 GGT2P36268 569 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 BUD31P41223 144 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 RGS6P49758 472 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 LIMK1P53667 647 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 MAZP56270 477 aaKnown RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 PRR5P85299 388 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ST3GAL4Q11206 333 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 UBXN2BQ14CS0 331 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 SEC23BQ15437 767 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 THOC7Q6I9Y2 204 aaKnown RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 FAM111BQ6SJ93 734 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 ABHD13Q7L211 337 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 TMEM52Q8NDY8 209 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 VANGL1Q8TAA9 524 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-210ENST00000538120 IL21RQ9HBE5 538 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 C3orf14Q9HBI5 128 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 A4GNTQ9UNA3 340 aa10.04□□□□□ -0.8
CLIP1-210ENST00000538120 URADA6NGE7 173 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 M0R3H8 397 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 CYP7B1O75881 506 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 IL33O95760 270 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 CSF2P04141 144 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 ST6GAL1P15907 406 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 CD27P26842 260 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 MAOBP27338 520 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 BLKP51451 505 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 UGT2B15P54855 530 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF45Q02386 682 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 PRKCDQ05655 676 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 USP53Q70EK8 1073 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 VASH1Q7L8A9 365 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 WDR53Q7Z5U6 358 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 OOSP2Q86WS3 158 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 GATAD2AQ86YP4 633 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 LRRC25Q8N386 305 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 ARHGEF39Q8N4T4 335 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 AQP11Q8NBQ7 271 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 OR4K14Q8NGD5 310 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 OR5T3Q8NGG3 340 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 RASSF5Q8WWW0 418 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 FCGR1BQ92637 280 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 RERGQ96A58 199 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-210ENST00000538120 SLC35A4Q96G79 324 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 SLC38A1Q9H2H9 487 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 LYRM4Q9HD34 91 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 EQTNQ9NQ60 294 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 STARD5Q9NSY2 213 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 FKBP14Q9NWM8 211 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 POMT2Q9UKY4 750 aa10.03□□□□□ -0.8
CLIP1-210ENST00000538120 A0A0G2JPF8 293 aa10.02□□□□□ -0.8
CLIP1-210ENST00000538120 HNRNPCL2B2RXH8 293 aa10.02□□□□□ -0.8
CLIP1-210ENST00000538120 HNRNPCL3B7ZW38 293 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms