RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SNTA1Q13424 505 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SQLEQ14534 574 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 DPY19L1Q2PZI1 675 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR2L13Q8N349 312 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GLB1L3Q8NCI6 653 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CA5BP1Q8WTZ4 195 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TESCQ96BS2 214 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ELP4Q96EB1 424 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 COL21A1Q96P44 957 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ADOQ96SZ5 270 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TTYH2Q9BSA4 534 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MRGBPQ9NV56 204 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 KLRF1Q9NZS2 232 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MED12LQ86YW9 2145 aa16.3■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C2orf72A6NCS6 295 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PRAMEF25A6NGN4 478 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ABCB7O75027 752 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 COQ9O75208 318 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 KIR3DL1P43629 444 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MRPL19P49406 292 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ATP4BP51164 291 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CRYZQ08257 329 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZNF155Q12901 538 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PGS1Q32NB8 556 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ANGPTL8Q6UXH0 198 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZNF551Q7Z340 670 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CAMKMTQ7Z624 323 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CCDC71Q8IV32 467 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLC44A2Q8IWA5 706 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR1J4Q8NGS1 313 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 RNF138Q8WVD3 245 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CIDECQ96AQ7 238 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 COQ8BQ96D53 544 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 DUSP26Q9BV47 211 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 BHLHE41Q9C0J9 482 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PCDHGB3Q9Y5G1 929 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SNRPB2P08579 225 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GLI4P10075 376 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 LAMP1P11279 417 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CHRNB4P30926 498 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FRKP42685 505 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PSPHP78330 225 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 EIPR1Q53HC9 387 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WDSUB1Q8N9V3 476 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR8J2Q8NGG1 315 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZFP28Q8NHY6 868 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ASB5Q8WWX0 329 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 EFHD2Q96C19 240 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TMCO6Q96DC7 493 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ZBED6CLQ96FA7 236 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TEX37Q96LM6 180 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CCT8L2Q96SF2 557 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 DDX18Q9NVP1 670 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ALKBH4Q9NXW9 302 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 CSMD2Q7Z408 3487 aa16.29■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C15orf38-AP3S2A0A0A6YYH1 394 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FAM107AO95990 144 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 IFI6P09912 130 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GABRA1P14867 456 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 S100A3P33764 101 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 HSPB3Q12988 150 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FAM174BQ3ZCQ3 159 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 C1orf185Q5T7R7 199 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WDR53Q7Z5U6 358 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 FAM83FQ8NEG4 500 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 LILRB4Q8NHJ6 448 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NUDT8Q8WV74 236 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TIMP4Q99727 224 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ACSS1Q9NUB1 689 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TMEM45AQ9NWC5 275 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR10H1Q9Y4A9 318 aa16.28■□□□□ 0.2
TNFRSF1A-209ENST00000536717 IL12BP29460 328 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 KRT20P35900 424 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ADH7P40394 386 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MANFP55145 182 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 GAB1Q13480 694 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 EFR3AQ14156 821 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 TOMM20Q15388 145 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 NHSL2Q5HYW2 709 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SPANXN4Q5MJ08 99 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 VASNQ6EMK4 673 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 PIGWQ7Z7B1 504 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 MCEMP1Q8IX19 187 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 ACBD4Q8NC06 268 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 VPS37AQ8NEZ2 397 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 OR9I1Q8NGQ6 314 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 LMF2Q9BU23 707 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 UCK2Q9BZX2 261 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 SERHLQ9NQF3 203 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 WIF1Q9Y5W5 379 aa16.27■□□□□ 0.2
TNFRSF1A-209ENST00000536717 A0A0G2JNJ9 132 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 A0A1W2PRB8 838 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FAM234BA2RU67 622 aa16.26■□□□□ 0.19
TNFRSF1A-209ENST00000536717 B4DXG7 233 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms