RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 TMEM114B3SHH9 223 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 ZIC3O60481 467 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 LYPLA1O75608 230 aaPredicted RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 NKX2-2O95096 273 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 ACP2P11117 423 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 MAPK1P28482 360 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 HPCAL1P37235 193 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 SERPINB4P48594 390 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 ASCL1P50553 236 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 PRKAG1P54619 331 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 DSCR4P56555 118 aaPredicted RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 CLDN18P56856 261 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 B3GALT5-AS1P59052 145 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 PTGR1Q14914 329 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 AAGABQ6PD74 315 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 PLXDC2Q6UX71 529 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 R3HCC1LQ7Z5L2 792 aaKnown RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 EXOC3L1Q86VI1 746 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 NUDCD3Q8IVD9 361 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 NUP43Q8NFH3 380 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 GPR151Q8TDV0 419 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 SIRT3Q9NTG7 399 aaPredicted RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 MED11Q9P086 117 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
UBC-204ENST00000536661 ATP6V1HQ9UI12 483 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 RAB21Q9UL25 225 aa13.55□□□□□ -0.24
UBC-204ENST00000536661 WDR91A4D1P6 747 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CLCA1A8K7I4 914 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CTIFO43310 598 aaKnown RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 ITM2AO43736 263 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 KCNH1O95259 989 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 UTS2O95399 124 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 ZNF708P17019 499 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CAPN3P20807 821 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CHMP24386 653 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 UQCRC1P31930 480 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 AGFG1P52594 562 aaKnown RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 GRAMD1BQ3KR37 738 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 FBXL19-AS1Q494R0 122 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 MFSD12Q6NUT3 480 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 LRIG3Q6UXM1 1119 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 APOOLQ6UXV4 268 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 ADGRE4PQ86SQ3 457 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 GALNT10Q86SR1 603 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 MARCH3Q86UD3 253 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CDRT4Q8N9R6 151 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 FNDC5Q8NAU1 212 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 SLC16A11Q8NCK7 471 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CEP70Q8NHQ1 597 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 SLC9A6Q92581 669 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 OTUB1Q96FW1 271 aaPredicted RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 SDHAF3Q9NRP4 125 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CLCF1Q9UBD9 225 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 CCDC168Q8NDH2 2452 aa13.54□□□□□ -0.24
UBC-204ENST00000536661 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
UBC-204ENST00000536661 EMC8O43402 210 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 HSPA4LO95757 839 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 TMIGD3P0DMS9 266 aaPredicted RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 LAMP1P11279 417 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 HK1P19367 917 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 CTSSP25774 331 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 DGKQP52824 942 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 FOXF2Q12947 444 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 MLC1Q15049 377 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 CHI3L2Q15782 390 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 DUSP5Q16690 384 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 EXOSC6Q5RKV6 272 aaKnown RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 RAET1LQ5VY80 246 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 ZAR1Q86SH2 424 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 CDH24Q86UP0 819 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 TMEM200AQ86VY9 491 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 PPP1R14CQ8TAE6 165 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 RNASE6Q93091 150 aaKnown RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 FAM120BQ96EK7 910 aaKnown RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 C16orf58Q96GQ5 468 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 TBL1XR1Q9BZK7 514 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 SLC24A3Q9HC58 644 aa13.53□□□□□ -0.24
UBC-204ENST00000536661 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
UBC-204ENST00000536661 HIVEP1P15822 2718 aa13.52□□□□□ -0.24
UBC-204ENST00000536661 EEF1E1-BLOC1S5C9J1V9 151 aa13.52□□□□□ -0.25
UBC-204ENST00000536661 SYT5O00445 386 aa13.52□□□□□ -0.25
UBC-204ENST00000536661 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms