RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KCNE3Q9Y6H6 103 aa11.98□□□□□ -0.49
PRKDC-206ENST00000536429 FIGNL2A6NMB9 653 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF195O14628 629 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 SCN2BO60939 215 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 CBR3O75828 277 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 KCNK2O95069 426 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 KCNH1O95259 989 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 C1QCP02747 245 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 GLI4P10075 376 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 DDX5P17844 614 aaKnown RBP11.97□□□□□ -0.49
PRKDC-206ENST00000536429 BMP7P18075 431 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 HTR1EP28566 365 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 IL12AP29459 219 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 ADH7P40394 386 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 CCT3P49368 545 aaKnown RBP11.97□□□□□ -0.49
PRKDC-206ENST00000536429 UFM1P61960 85 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 RPS26P62854 115 aaKnown RBP11.97□□□□□ -0.49
PRKDC-206ENST00000536429 PRR5P85299 388 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 TP53BP2Q13625 1128 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 SPDYE7PQ495Y7 208 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 SPANXN4Q5MJ08 99 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 C1orf185Q5T7R7 199 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 WLSQ5T9L3 541 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 OGFOD2Q6N063 350 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 XKRXQ6PP77 449 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 HDXQ7Z353 690 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 FAM110BQ8TC76 370 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 JADE3Q92613 823 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 MARK4Q96L34 752 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
PRKDC-206ENST00000536429 TTYH2Q9BSA4 534 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 DPY30Q9C005 99 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 OR2B2Q9GZK3 357 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 SERHL2Q9H4I8 314 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 AIG1Q9NVV5 245 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 RNF6Q9Y252 685 aa11.97□□□□□ -0.49
PRKDC-206ENST00000536429 TTC36A6NLP5 189 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 KLF11O14901 512 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 CFLARO15519 480 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ZIC3O60481 467 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 CLDN14O95500 239 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ALOX5P09917 674 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 AGAP20933 346 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 SOAT1P35610 550 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF630Q2M218 657 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 VPS26BQ4G0F5 336 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 NHSL2Q5HYW2 709 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 SP5Q6BEB4 398 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 VASNQ6EMK4 673 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 B3GNT6Q6ZMB0 384 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 EID3Q8N140 333 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 COX18Q8N8Q8 333 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 FADS6Q8N9I5 356 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 OR2M3Q8NG83 312 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 OR4C3Q8NH37 302 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 CDS1Q92903 461 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 CHMP6Q96FZ7 201 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 OR52B2Q96RD2 323 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 KLHDC3Q9BQ90 382 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 UCK2Q9BZX2 261 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 PRDM14Q9GZV8 571 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 DSN1Q9H410 356 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 SLCO1B3Q9NPD5 702 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 FAM120CQ9NX05 1096 aaKnown RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 TAS2R10Q9NYW0 307 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 MED11Q9P086 117 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 PPP4R1LQ9P1A2 415 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ABCG2Q9UNQ0 655 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 RPH3AQ9Y2J0 694 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-206ENST00000536429 GPR45Q9Y5Y3 372 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 ITPR2Q14571 2701 aa11.96□□□□□ -0.49
PRKDC-206ENST00000536429 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 A0A0G2JNJ9 132 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 FAM90A27PA6NNH2 459 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 RNASET2O00584 256 aaKnown RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 GMFGO60234 142 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 WDR1O75083 606 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 SRD5A2P31213 254 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 KIR3DL1P43629 444 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 PRIM2P49643 509 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 STARP49675 285 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 DGKQP52824 942 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 CASP9P55211 416 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 GFRA1P56159 465 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 B3GALT5-AS1P59052 145 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 FAM174BQ3ZCQ3 159 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms