RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 HHATLQ9HCP6 504 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 EXD2Q9NVH0 621 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 LEF1Q9UJU2 399 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 NDUFAF1Q9Y375 327 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 NUP214P35658 2090 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 A0A096LPI6 279 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 A0A1B0GUH1 482 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 GXYLT2A0PJZ3 443 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 WIPF3A6NGB9 483 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 PRAMEF25A6NGN4 478 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 GSNP06396 782 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 SNRPB2P08579 225 aaKnown RBP12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CYP4B1P13584 511 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CAPN3P20807 821 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 DRD4P21917 467 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CASP3P42574 277 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CDKN2CP42773 168 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 MASP1P48740 699 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 MAN2A2P49641 1150 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
RPAIN-205ENST00000536255 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CMPK2Q5EBM0 449 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 SLC2A7Q6PXP3 512 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CLEC4FQ8N1N0 589 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 FAM110BQ8TC76 370 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CDS1Q92903 461 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 RELTQ969Z4 430 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 ZNF597Q96LX8 424 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 PSMG3-AS1Q96PY0 264 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 NODALQ96S42 347 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 OR51I1Q9H343 314 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 IL1RL2Q9HB29 575 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 ZFP64Q9NPA5 681 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 SAR1AQ9NR31 198 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 B4GALT7Q9UBV7 327 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 ABCG2Q9UNQ0 655 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 CAPN7Q9Y6W3 813 aa12.39□□□□□ -0.43
RPAIN-205ENST00000536255 SETXQ7Z333 2677 aaKnown RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 DOPEY2Q9Y3R5 2298 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 TRGV8A0A0C4DH27 118 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 SNX3O60493 162 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 ICOSLGO75144 302 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 GLSO94925 669 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 HPGDP15428 266 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 PPIBP23284 216 aaKnown RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 ELAVL4P26378 380 aaKnown RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 EVI2BP34910 448 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 CA7P43166 264 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 PER3P56645 1201 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 HSF1Q00613 529 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 FOXO1Q12778 655 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 KLF10Q13118 480 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 DCST2Q5T1A1 773 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 LRIF1Q5T3J3 769 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 TNFAIP8L2Q6P589 184 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 FIGNL1Q6PIW4 674 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 C16orf62Q7Z3J2 963 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 FJX1Q86VR8 437 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 RNF130Q86XS8 419 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 CHERPQ8IWX8 916 aaKnown RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 OR5D16Q8NGK9 328 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 XAGE5Q8WWM1 108 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 OTUB1Q96FW1 271 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 TMEM41AQ96HV5 264 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 JSRP1Q96MG2 331 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 NMUR2Q9GZQ4 415 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 HOXD1Q9GZZ0 328 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 SLC52A3Q9NQ40 469 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 SDHAF3Q9NRP4 125 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 THUMPD1Q9NXG2 353 aaKnown RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 TUBA8Q9NY65 449 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 ZNF835Q9Y2P0 537 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
RPAIN-205ENST00000536255 USP9YO00507 2555 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-205ENST00000536255 BBIP1A8MTZ0 92 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
RPAIN-205ENST00000536255 TRIM3O75382 744 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-205ENST00000536255 UTS2O95399 124 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 NGFRP08138 427 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 OR12D1P0DN82 309 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 ABOP16442 354 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 CASP6P55212 293 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 HPCAP84074 193 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 BICRALQ6AI39 1079 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 Q6ZPB1 254 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-205ENST00000536255 FGD2Q7Z6J4 655 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 DPP10Q8N608 796 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 ZNF527Q8NB42 609 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 CHDHQ8NE62 594 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-205ENST00000536255 OR52N2Q8NGI0 321 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms