RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RAB8BQ92930 207 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 NEURL3Q96EH8 262 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 AURKBQ96GD4 344 aaPredicted RBP16.33■□□□□ 0.2
DDX55-204ENST00000536079 SLC35G5Q96KT7 338 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 ZNF597Q96LX8 424 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 SIKE1Q9BRV8 207 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 PAIP1Q9H074 479 aaKnown RBP16.33■□□□□ 0.2
DDX55-204ENST00000536079 UBQLN3Q9H347 655 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 GIN1Q9NXP7 522 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 SLAMF8Q9P0V8 285 aa16.33■□□□□ 0.2
DDX55-204ENST00000536079 BOKQ9UMX3 212 aaPredicted RBP16.33■□□□□ 0.2
DDX55-204ENST00000536079 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.2
DDX55-204ENST00000536079 RFXANKO14593 260 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 SEMA7AO75326 666 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 OR12D1P0DN82 309 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 TROVE2P10155 538 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX55-204ENST00000536079 HOXB9P17482 250 aaPredicted RBP16.32■□□□□ 0.2
DDX55-204ENST00000536079 ENDOUP21128 410 aaKnown RBP16.32■□□□□ 0.2
DDX55-204ENST00000536079 RNF144AP50876 292 aaPredicted RBP16.32■□□□□ 0.2
DDX55-204ENST00000536079 FUT5Q11128 374 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 SNTA1Q13424 505 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX55-204ENST00000536079 KRTCAP3Q53RY4 240 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 TIGD3Q6B0B8 471 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 RNF130Q86XS8 419 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 FAM109AQ8N4B1 249 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 PNPT1Q8TCS8 783 aaKnown RBP16.32■□□□□ 0.2
DDX55-204ENST00000536079 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 C10orf82Q8WW14 230 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 SLC6A15Q9H2J7 730 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 TNFRSF10DQ9UBN6 386 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 FBXL2Q9UKC9 423 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 WIF1Q9Y5W5 379 aa16.32■□□□□ 0.2
DDX55-204ENST00000536079 RNF224P0DH78 156 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 CHI3L1P36222 383 aaPredicted RBP16.31■□□□□ 0.2
DDX55-204ENST00000536079 MASP1P48740 699 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 MVDP53602 400 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 MSANTD1Q6ZTZ1 278 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 TRILQ7L0X0 811 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 MSRB3Q8IXL7 192 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 SPDL1Q96EA4 605 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 ITCHQ96J02 903 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 SDF2Q99470 211 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 KLHDC3Q9BQ90 382 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 SPRR3Q9UBC9 169 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 ZNF835Q9Y2P0 537 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 PCDHB14Q9Y5E9 798 aa16.31■□□□□ 0.2
DDX55-204ENST00000536079 CENPVL1A0A0U1RR11 272 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 CLEC18AA5D8T8 446 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 ACOT7O00154 380 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 HMGN4O00479 90 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 OXSR1O95747 527 aaPredicted RBP16.3■□□□□ 0.2
DDX55-204ENST00000536079 IGHG3P01860 377 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 GDF1P27539 372 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 TRPC1P48995 793 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 STX5Q13190 355 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 UBAP2LQ14157 1087 aaKnown RBP16.3■□□□□ 0.2
DDX55-204ENST00000536079 SLC10A1Q14973 349 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 C3AR1Q16581 482 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 EIPR1Q53HC9 387 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 C1QL3Q5VWW1 255 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 CLEC18BQ6UXF7 455 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 BNC2Q6ZN30 1099 aaPredicted RBP16.3■□□□□ 0.2
DDX55-204ENST00000536079 GHDCQ8N2G8 530 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 GATSQ8NAP1 163 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 CLEC18CQ8NCF0 446 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 OR1J4Q8NGS1 313 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 XAGE5Q8WWM1 108 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 SLC25A37Q9NYZ2 338 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 KLHL14Q9P2G3 628 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 KCNE5Q9UJ90 142 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 MRTO4Q9UKD2 239 aaKnown RBP16.3■□□□□ 0.2
DDX55-204ENST00000536079 FLNCQ14315 2725 aa16.3■□□□□ 0.2
DDX55-204ENST00000536079 A0A1B0GVC2 190 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 NPIPB9F8W1W9 429 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 FCMRO60667 390 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 SLC19A2O60779 497 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 KRT16P08779 473 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 STSP08842 583 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ZCCHC18P0CG32 403 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 TBXA2RP21731 343 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 DRD4P21917 467 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 LRRC74AQ0VAA2 488 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
DDX55-204ENST00000536079 MAPK11Q15759 364 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 C6orf10Q5SRN2 563 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX55-204ENST00000536079 METTL21CQ5VZV1 264 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 HEPHL1Q6MZM0 1159 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 YRDCQ86U90 279 aaKnown RBP16.29■□□□□ 0.2
DDX55-204ENST00000536079 RETREG3Q86VR2 466 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ZGRF1Q86YA3 2104 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 CHDHQ8NE62 594 aaPredicted RBP16.29■□□□□ 0.2
DDX55-204ENST00000536079 DUSP19Q8WTR2 217 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms