RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MTHFD2LQ9H903 347 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ADAP2Q9NPF8 381 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CNIH4Q9P003 139 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 GALR3O60755 368 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SNX4O95219 450 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 CKMT1AP12532 417 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 IGFBP4P22692 258 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 GTF2E2P29084 291 aaKnown RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 PCYT1AP49585 367 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 RGS8P57771 180 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 EFNB1P98172 346 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ST3GAL3Q11203 375 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 TRAM2Q15035 370 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SPHARQ15513 63 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SPANXN2Q5MJ10 180 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 GDPGP1Q6ZNW5 385 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 CCDC190Q86UF4 302 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 HTRA1Q92743 480 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 TSSK6Q9BXA6 273 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 KLHL28Q9NXS3 571 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 MN1Q10571 1320 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 A0A075B6Q4 140 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 AGR2O95994 175 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ATP1B1P05026 303 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ST6GAL1P15907 406 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SOX3P41225 446 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 GPR68Q15743 365 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 DEFB110Q30KQ9 67 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF730Q6ZMV8 503 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 CA13Q8N1Q1 262 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 PROKR2Q8NFJ6 384 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 FGF11Q92914 225 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 FAM46AQ96IP4 442 aaKnown RBP12.47□□□□□ -0.41
VPS33B-202ENST00000535906 MCHR1Q99705 422 aa12.47□□□□□ -0.41
VPS33B-202ENST00000535906 A0A1W2PPC4 97 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 SGK494L7N484 410 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 GPR75O95800 540 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 CT62P0C5K7 136 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 GSTM3P21266 225 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 OMPP47874 163 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 KRR1Q13601 381 aaKnown RBP12.46□□□□□ -0.41
VPS33B-202ENST00000535906 MANEAQ5SRI9 462 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 PEX5LQ8IYB4 626 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 ZDHHC1Q8WTX9 485 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 PIK3R3Q92569 461 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 LRR1Q96L50 414 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 PIGUQ9H490 435 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 FBXO34Q9NWN3 711 aa12.46□□□□□ -0.41
VPS33B-202ENST00000535906 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.41
VPS33B-202ENST00000535906 B4DGG1 531 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 AP3D1O14617 1153 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 CHRNB1P11230 501 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 NT5EP21589 574 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SMSP52788 366 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 TSPAN31Q12999 210 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 EXOSC7Q15024 291 aaKnown RBP12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SNAPC1Q16533 368 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 MAPK14Q16539 360 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 PRICKLE4Q2TBC4 344 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 PLEKHM3Q6ZWE6 761 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 RRM2BQ7LG56 351 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 GDF7Q7Z4P5 450 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 C11orf74Q86VG3 221 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 GJD3Q8N144 294 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 NR4A3Q92570 626 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 KLHDC7BQ96G42 594 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 CNPPD1Q9BV87 410 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 LRRC61Q9BV99 259 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 ASPNQ9BXN1 380 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SAP130Q9H0E3 1048 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 NDUFB11Q9NX14 153 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SEC14L4Q9UDX3 406 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF232Q9UNY5 417 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SPACA6W5XKT8 324 aa12.46□□□□□ -0.42
VPS33B-202ENST00000535906 SPTBP11277 2137 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 CTDSP2O14595 271 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 PLOD3O60568 738 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms