RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SCDO00767 359 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 RFPL3SP0C7P2 107 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 TROVE2P10155 538 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSPN-204ENST00000535504 SF3B4Q15427 424 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSPN-204ENST00000535504 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSPN-204ENST00000535504 DESI1Q6ICB0 168 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 FIGNL1Q6PIW4 674 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 C6orf120Q7Z4R8 191 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 ZNF527Q8NB42 609 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 OR14L1PQ8NHC6 308 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 NEIL3Q8TAT5 605 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 NUDT8Q8WV74 236 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 HOXB13Q92826 284 aaPredicted RBP19.97■□□□□ 0.79
SSPN-204ENST00000535504 CCDC115Q96NT0 180 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 HOXD1Q9GZZ0 328 aa19.97■□□□□ 0.79
SSPN-204ENST00000535504 SDR39U1Q9NRG7 319 aaPredicted RBP19.97■□□□□ 0.79
SSPN-204ENST00000535504 NUP214P35658 2090 aaPredicted RBP19.97■□□□□ 0.79
SSPN-204ENST00000535504 DNAJC13O75165 2243 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 C2orf72A6NCS6 295 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 ZNF195O14628 629 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 KCNK2O95069 426 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 HPNP05981 417 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 PTPN6P29350 595 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 TRPC1P48995 793 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 IDH3AP50213 366 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 POLR2JP52435 117 aaKnown RBP19.96■□□□□ 0.79
SSPN-204ENST00000535504 WNT3P56703 355 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 TXNL4AP83876 142 aaKnown RBP19.96■□□□□ 0.79
SSPN-204ENST00000535504 STX5Q13190 355 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 MSANTD1Q6ZTZ1 278 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 C16orf62Q7Z3J2 963 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 CDS1Q92903 461 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 SLC35A5Q9BS91 424 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 SLC6A15Q9H2J7 730 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 RABEP2Q9H5N1 569 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 SERHLQ9NQF3 203 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 UBQLN4Q9NRR5 601 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 LIPGQ9Y5X9 500 aa19.96■□□□□ 0.79
SSPN-204ENST00000535504 DIDO1Q9BTC0 2240 aaKnown RBP19.96■□□□□ 0.79
SSPN-204ENST00000535504 ZNF407Q9C0G0 2248 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 FAM47E-STBD1D6RA91 191 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 E9PLN8 166 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 H3BNH8 94 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 RFXANKO14593 260 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 EDF1O60869 148 aaKnown RBP19.95■□□□□ 0.78
SSPN-204ENST00000535504 WISP2O76076 250 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 LDLRP01130 860 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 CELA3AP09093 270 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 PTGDSP41222 190 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 MAP3K8P41279 467 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 KHKP50053 298 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 DGKQP52824 942 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 HPCAP84074 193 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 C17orf67Q0P5P2 114 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 DCST2Q5T1A1 773 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 ZNF621Q6ZSS3 439 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 MISPQ8IVT2 679 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 PM20D2Q8IYS1 436 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 OTUB1Q96FW1 271 aaPredicted RBP19.95■□□□□ 0.78
SSPN-204ENST00000535504 ITCHQ96J02 903 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 OR7D2Q96RA2 312 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 VKORC1Q9BQB6 163 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 GPATCH2Q9NW75 528 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 ALKBH4Q9NXW9 302 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 MEMO1Q9Y316 297 aa19.95■□□□□ 0.78
SSPN-204ENST00000535504 FAM234BA2RU67 622 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 NDUFB5O43674 189 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 WDR1O75083 606 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 KRT75O95678 551 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 NGFRP08138 427 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 HOXD4P09016 255 aaPredicted RBP19.94■□□□□ 0.78
SSPN-204ENST00000535504 GABRA1P14867 456 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 SRD5A2P31213 254 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 SRSF1Q07955 248 aaKnown RBP eCLIP19.94■□□□□ 0.78
SSPN-204ENST00000535504 GANABQ14697 944 aaKnown RBP19.94■□□□□ 0.78
SSPN-204ENST00000535504 GRAMD1BQ3KR37 738 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 GXYLT1Q4G148 440 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 ZNF585AQ6P3V2 769 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 AAGABQ6PD74 315 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 ENPP6Q6UWR7 440 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 IFNEQ86WN2 208 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 DOLPP1Q86YN1 238 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 TEX37Q96LM6 180 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 UBQLN3Q9H347 655 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 NPHS2Q9NP85 383 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 COQ3Q9NZJ6 369 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 MYO7BQ6PIF6 2116 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 TENM4Q6N022 2769 aa19.94■□□□□ 0.78
SSPN-204ENST00000535504 CCDC154A6NI56 674 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 C9JVG2 144 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 FADS1O60427 444 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 ANGPTL1O95841 491 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 VIMP08670 466 aaKnown RBP19.93■□□□□ 0.78
SSPN-204ENST00000535504 ENDOUP21128 410 aaKnown RBP19.93■□□□□ 0.78
SSPN-204ENST00000535504 TBXA2RP21731 343 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 PTGER4P35408 488 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 DSCR4P56555 118 aaPredicted RBP19.93■□□□□ 0.78
SSPN-204ENST00000535504 FLYWCH1Q4VC44 716 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 C6orf10Q5SRN2 563 aa19.93■□□□□ 0.78
SSPN-204ENST00000535504 FNDC7Q5VTL7 733 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms