RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SHISA6Q6ZSJ9 500 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 DPY19L4Q7Z388 723 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 DCP2Q8IU60 420 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 ARL6Q9H0F7 186 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 TOXO94900 526 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 MORN1Q5T089 497 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF704Q6ZNC4 412 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 C15orf39Q6ZRI6 1047 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 NAGSQ8N159 534 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 ENDOVQ8N8Q3 282 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 SFXN5Q8TD22 340 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 IGSF5Q9NSI5 407 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 CHMP24386 653 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 CNR2P34972 360 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 OR7A5Q15622 319 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 OR51L1Q8NGJ5 315 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 DMRT3Q9NQL9 472 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 KLHL9Q9P2J3 617 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 HEMK1Q9Y5R4 338 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 XCR1P46094 333 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 SFRP4Q6FHJ7 346 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 ANKK1Q8NFD2 765 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 PGAP3Q96FM1 320 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 ERVK-19Q9WJR5 959 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 PCDHGA8Q9Y5G5 932 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 TRAV18A0A075B6X5 111 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 IL4RP24394 825 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 CAMLGP49069 296 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 FXYD4P59646 89 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 MZT1Q08AG7 82 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 MAP4K2Q12851 820 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 MCATQ8IVS2 390 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 CMTM1Q8IZ96 169 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC39A11Q8N1S5 342 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 PINK1Q9BXM7 581 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 RIMS3Q9UJD0 308 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC9B1P1A6NJY1 282 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 M0R3H8 397 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 OR2T1O43869 369 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 TNFRSF1BP20333 461 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 PTH2RP49190 550 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 OR7G3Q8NG95 312 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 OR56B2PQ8NGI1 322 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 INPP5KQ9BT40 448 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 B3GNT2Q9NY97 397 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 SH3BGRL2Q9UJC5 107 aa17.16■□□□□ 0.34
SFSWAP-203ENST00000535236 ATP6V1G1O75348 118 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SERPINA5P05154 406 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 OR8U9P0C7N5 309 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 FUT1P19526 365 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 WDR5P61964 334 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 RBPJQ06330 500 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 OR52E1Q8NGJ3 308 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 MAELQ96JY0 434 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 CHRDQ9H2X0 955 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 NMNAT1Q9HAN9 279 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 B3GNT3Q9Y2A9 372 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ANTXRLA6NF34 631 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 GABBR2O75899 941 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 EEF1A1P68104 462 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 TXNDC15Q96J42 360 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 PBDC1Q9BVG4 233 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ARMC1Q9NVT9 282 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 CDK3Q00526 305 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 TGFBR3Q03167 851 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 GALNT1Q10472 559 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 PTPRRQ15256 657 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 MICAQ29983 383 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 HSD11B1LQ7Z5J1 315 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SCML4Q8N228 414 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 OR5T1Q8NG75 326 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 CD200R1Q8TD46 325 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 NETO1Q8TDF5 533 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 GHRLQ9UBU3 117 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SHOXO15266 292 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 MAOBP27338 520 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 CSNK1A1P48729 337 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 RAB31Q13636 194 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 TMEM184AQ6ZMB5 413 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SULT4A1Q9BR01 284 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ADAMTS6Q9UKP5 1117 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC1A7O00341 560 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 MT-CO2P00403 227 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF14P17017 642 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 EPHA1P21709 976 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 FAM189BP81408 668 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 BCL2A1Q16548 175 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 LCN8Q6JVE9 175 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 RANBP10Q6VN20 620 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SCD5Q86SK9 330 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF695Q8IW36 515 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 SLC2A12Q8TD20 617 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 PHB2Q99623 299 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 HCAR1Q9BXC0 346 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 ZFP57Q9NU63 452 aa17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 PPP1R14DQ9NXH3 145 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms