RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 KCNE3Q9Y6H6 103 aa18.8■□□□□ 0.6
CHFR-209ENST00000535181 TRBV5-3A0A0A0MS03 114 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 ADAM10O14672 748 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 TFECO14948 347 aaPredicted RBP18.79■□□□□ 0.6
CHFR-209ENST00000535181 SNPHO15079 494 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 ANGPT2O15123 496 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 UTS2O95399 124 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 RFC3P40938 356 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 MVDP53602 400 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 GAS1P54826 345 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 PPIAP62937 165 aaKnown RBP18.79■□□□□ 0.6
CHFR-209ENST00000535181 UBAP2LQ14157 1087 aaKnown RBP18.79■□□□□ 0.6
CHFR-209ENST00000535181 MAPRE2Q15555 327 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 ARHGAP11BQ3KRB8 267 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 GTDC1Q4AE62 458 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 COQ5Q5HYK3 327 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 ATAD3BQ5T9A4 648 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 FNDC7Q5VTL7 733 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 TNFAIP8L2Q6P589 184 aaPredicted RBP18.79■□□□□ 0.6
CHFR-209ENST00000535181 FIGNL1Q6PIW4 674 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 FAM109AQ8N4B1 249 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 SDF2Q99470 211 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 FAM107BQ9H098 131 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 ZNF703Q9H7S9 590 aaPredicted RBP18.79■□□□□ 0.6
CHFR-209ENST00000535181 HHATLQ9HCP6 504 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 UBQLN4Q9NRR5 601 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 B4GALT7Q9UBV7 327 aa18.79■□□□□ 0.6
CHFR-209ENST00000535181 NINQ8N4C6 2090 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 HMGN4O00479 90 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 CBX6O95503 412 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 C1QCP02747 245 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 OR12D1P0DN82 309 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 ATP6V1C1P21283 382 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 TBXA2RP21731 343 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 RFX3P48380 749 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 MASP1P48740 699 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 CLK3P49761 638 aaKnown RBP18.78■□□□□ 0.6
CHFR-209ENST00000535181 GRAMD1BQ3KR37 738 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 CCNJQ5T5M9 372 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 TIGD3Q6B0B8 471 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 ANGPTL8Q6UXH0 198 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 PIGWQ7Z7B1 504 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 ZAR1Q86SH2 424 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 TMEM251Q8N6I4 163 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 OR52N2Q8NGI0 321 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 OIT3Q8WWZ8 545 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 ZNF350Q9GZX5 532 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 HOXD1Q9GZZ0 328 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 UBQLN3Q9H347 655 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 RAD21L1Q9H4I0 556 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 GALNT9Q9HCQ5 603 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 POLE3Q9NRF9 147 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 PLSCR2Q9NRY7 297 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 FBXO34Q9NWN3 711 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 THUMPD1Q9NXG2 353 aaKnown RBP18.78■□□□□ 0.6
CHFR-209ENST00000535181 SLC25A37Q9NYZ2 338 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 CAPN7Q9Y6W3 813 aa18.78■□□□□ 0.6
CHFR-209ENST00000535181 A0A1W2PQD3 144 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 BBIP1A8MTZ0 92 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 ALG1L2C9J202 215 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 NPIPA5E9PKD4 350 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 SHOX2O60902 331 aaPredicted RBP18.77■□□□□ 0.6
CHFR-209ENST00000535181 PPIBP23284 216 aaKnown RBP18.77■□□□□ 0.6
CHFR-209ENST00000535181 IGFBP7Q16270 282 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 CMPK2Q5EBM0 449 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 DLEU7Q6UYE1 221 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 C16orf62Q7Z3J2 963 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 MSRB3Q8IXL7 192 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 SDHAF3Q9NRP4 125 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 FLRT3Q9NZU0 649 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 SLAMF8Q9P0V8 285 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 SEC14L3Q9UDX4 400 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 NPIPA1Q9UND3 350 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 LIPT1Q9Y234 373 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 C15orf41Q9Y2V0 281 aa18.77■□□□□ 0.6
CHFR-209ENST00000535181 FAM166BA8MTA8 275 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 NPIPB9F8W1W9 429 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 J3QKU1 62 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 CLIC1O00299 241 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 STX11O75558 287 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 OXSR1O95747 527 aaPredicted RBP18.76■□□□□ 0.59
CHFR-209ENST00000535181 IGHG3P01860 377 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 CASP9P55211 416 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 FUT5Q11128 374 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 FADDQ13158 208 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 COX20Q5RI15 118 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 RETREG3Q86VR2 466 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 GHDCQ8N2G8 530 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 WDSUB1Q8N9V3 476 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 OR1J4Q8NGS1 313 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 OR4C3Q8NH37 302 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 PNPT1Q8TCS8 783 aaKnown RBP18.76■□□□□ 0.59
CHFR-209ENST00000535181 XAGE5Q8WWM1 108 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 RAB8BQ92930 207 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 DTNBP1Q96EV8 351 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 AURKBQ96GD4 344 aaPredicted RBP18.76■□□□□ 0.59
CHFR-209ENST00000535181 JSRP1Q96MG2 331 aaPredicted RBP18.76■□□□□ 0.59
CHFR-209ENST00000535181 TBL1XR1Q9BZK7 514 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 SAP130Q9H0E3 1048 aa18.76■□□□□ 0.59
CHFR-209ENST00000535181 VAPAQ9P0L0 249 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms