RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FOXC2Q99958 501 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 NDFIP1Q9BT67 221 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 SLC25A23Q9BV35 468 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 CARD6Q9BX69 1037 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 GPR61Q9BZJ8 451 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 ZHX3Q9H4I2 956 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 FANCFQ9NPI8 374 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 EHFQ9NZC4 300 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 C6orf203Q9P0P8 240 aaPredicted RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 OR1A1Q9P1Q5 309 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 LHX3Q9UBR4 397 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 GIMAP2Q9UG22 337 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 PSORS1C1Q9UIG5 152 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 GPR34Q9UPC5 381 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 L3MBTL1Q9Y468 752 aa0.16□□□□□ -2.38
COPB1-212ENST00000534771 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.16□□□□□ -2.38
COPB1-212ENST00000534771 IGSF9BQ9UPX0 1349 aa0.15□□□□□ -2.38
COPB1-212ENST00000534771 A0A087WV48 116 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 GSAPA4D1B5 854 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 C5orf52A6NGY3 159 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 KBTBD13C9JR72 458 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 NPIPA2E9PIF3 369 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 FAM86B1E9PN63 330 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 H0YIG0 161 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 SH2D1BO14796 132 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RRP8O43159 456 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 ANGPTL7O43827 346 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 OR10H3O60404 316 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 SCRG1O75711 98 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RAD51DO75771 328 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 CHRNA1P02708 482 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 GSTA1P08263 222 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 FAM86B2P0C5J1 330 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 TPBGLP0DKB5 382 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 THRBP10828 461 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 CRISP2P16562 243 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 LGALS3P17931 250 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 TIA1P31483 386 aaKnown RBP eCLIP0.15□□□□□ -2.39
COPB1-212ENST00000534771 RPL29P47914 159 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 DHPSP49366 369 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 GPC3P51654 580 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 NLRP11P59045 1033 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 IFI35P80217 286 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 AKAP17AQ02040 695 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 PLOD1Q02809 727 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 C17orf67Q0P5P2 114 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 ARFRP1Q13795 201 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 KLF5Q13887 457 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 EXOSC7Q15024 291 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 HYAL4Q2M3T9 481 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 KRTAP21-3Q3LHN1 58 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MPPE1Q53F39 396 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 FAM91A1Q658Y4 838 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RTL6Q6ICC9 239 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 ACP7Q6ZNF0 438 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 C1orf122Q6ZSJ8 110 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 ERN2Q76MJ5 926 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 COX15Q7KZN9 410 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 ASRGL1Q7L266 308 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 DZIP1Q86YF9 867 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 C12orf56Q8IXR9 622 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 THEM5Q8N1Q8 247 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 PYROXD2Q8N2H3 581 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MTURNQ8N3F0 131 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 Q8N976 141 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 IQUBQ8NA54 791 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 OR2T33Q8NG76 320 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 OR6J1Q8NGC5 347 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RDH11Q8TC12 318 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 IL1F10Q8WWZ1 152 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MRPS27Q92552 414 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 LHX4Q969G2 390 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 PSMG2Q969U7 264 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RMDN1Q96DB5 314 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 TVP23CQ96ET8 276 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 BSCL2Q96G97 398 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 COG3Q96JB2 828 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 OR10C1Q96KK4 312 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RASL10BQ96S79 203 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 RASL11BQ9BPW5 248 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 INPP5KQ9BT40 448 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 POLR2J2Q9GZM3 115 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 LSG1Q9H089 658 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 POLR2J3Q9H1A7 115 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 IL1RAPL2Q9NP60 686 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 NGBQ9NPG2 151 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MEPEQ9NQ76 525 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 PNO1Q9NRX1 252 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 PNPLA3Q9NST1 481 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 PIGVQ9NUD9 493 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 VPS18Q9P253 973 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 SPRR3Q9UBC9 169 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MTRF1LQ9UGC7 380 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 SWAP70Q9UH65 585 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 DCDC2Q9UHG0 476 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 BTNL2Q9UIR0 455 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 ZNF391Q9UJN7 358 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 MRTO4Q9UKD2 239 aaKnown RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 DUSP12Q9UNI6 340 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 WDR45Q9Y484 360 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms