RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 AP4B1Q9Y6B7 739 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 PLOD3O60568 738 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 SOD3P08294 240 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 CDKN1AP38936 164 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 CDH13P55290 713 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 CTBP2P56545 445 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 GNG11P61952 73 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 PSG6Q00889 435 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 OCRLQ01968 901 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 CTU2Q2VPK5 515 aaKnown RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 TCHHL1Q5QJ38 904 aaPredicted RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 MARCH3Q86UD3 253 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 HIPK1Q86Z02 1210 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 FAM9CQ8IZT9 166 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 DUSP19Q8WTR2 217 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 TRMT61AQ96FX7 289 aaKnown RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 GMPPAQ96IJ6 420 aaPredicted RBP13.37□□□□□ -0.27
CTSB-230ENST00000534149 TAS2R9Q9NYW1 312 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 VPS29Q9UBQ0 182 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 SNX6Q9UNH7 406 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 ABCG2Q9UNQ0 655 aa13.37□□□□□ -0.27
CTSB-230ENST00000534149 OVOL3O00110 214 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 CD5LO43866 347 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 PCDH7O60245 1069 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 SS18L1O75177 396 aaPredicted RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 SMIM24O75264 130 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 OTCP00480 354 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 RPS17P08708 135 aaKnown RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 RBP1P09455 135 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 CHN1P15882 459 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 IDUAP35475 653 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 ACVR1BP36896 505 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 TRADDQ15628 312 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 ETFDHQ16134 617 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 LILRB1Q8NHL6 650 aaPredicted RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 TMEM158Q8WZ71 300 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 GTPBP3Q969Y2 492 aaKnown RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 SLCO5A1Q9H2Y9 848 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 SLC35C2Q9NQQ7 365 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 GIMAP4Q9NUV9 329 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 NMRK1Q9NWW6 199 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 FAM120CQ9NX05 1096 aaKnown RBP13.36□□□□□ -0.27
CTSB-230ENST00000534149 RNF14Q9UBS8 474 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 ZNF225Q9UK10 706 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 TMCO1Q9UM00 188 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 CADP27708 2225 aa13.36□□□□□ -0.27
CTSB-230ENST00000534149 GNG14A0A1W2PPG7 69 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 CLOCKO15516 846 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 COQ9O75208 318 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 OR4F21O95013 312 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 RFX3P48380 749 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 RAE1P78406 368 aaKnown RBP13.35□□□□□ -0.27
CTSB-230ENST00000534149 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 C2orf54Q08AI8 447 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 DECR1Q16698 335 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.35□□□□□ -0.27
CTSB-230ENST00000534149 TMEM44Q2T9K0 475 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 GLYR1Q49A26 553 aaPredicted RBP13.35□□□□□ -0.27
CTSB-230ENST00000534149 CYP27C1Q4G0S4 372 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 ZDHHC24Q6UX98 284 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 OR10D3Q8NH80 312 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 ZNF483Q8TF39 744 aaPredicted RBP13.35□□□□□ -0.27
CTSB-230ENST00000534149 NEUROG1Q92886 237 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 FBXW5Q969U6 566 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 TACO1Q9BSH4 297 aaKnown RBP13.35□□□□□ -0.27
CTSB-230ENST00000534149 KCNF1Q9H3M0 494 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 C12orf49Q9H741 205 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 FANCFQ9NPI8 374 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
CTSB-230ENST00000534149 MAGED1Q9Y5V3 778 aaPredicted RBP13.35□□□□□ -0.27
CTSB-230ENST00000534149 FREM1Q5H8C1 2179 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 MANBAO00462 879 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 CXCL13O43927 109 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 ADAM11O75078 769 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 IGHV4-39P01824 125 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 OPN1LWP04000 364 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 DANCRP0C864 163 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 PSMB1P20618 241 aaKnown RBP13.34□□□□□ -0.27
CTSB-230ENST00000534149 IL11P20809 199 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 MPIP34949 423 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 CLK3P49761 638 aaKnown RBP13.34□□□□□ -0.27
CTSB-230ENST00000534149 CAV1Q03135 178 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 FAPQ12884 760 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 CHRFAM7AQ494W8 412 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 ADAM5Q6NVV9 412 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 CDYL2Q8N8U2 506 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 C16orf78Q8WTQ4 265 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 S100PBPQ96BU1 408 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
CTSB-230ENST00000534149 ADGRG7Q96K78 797 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 BBS4Q96RK4 519 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms