RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ARRB2P32121 409 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 KIR2DL3P43628 341 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 GAS1P54826 345 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 UGT3A2Q3SY77 523 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 ATP6AP1LQ52LC2 224 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 RAET1LQ5VY80 246 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 FIGNL1Q6PIW4 674 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 RNF165Q6ZSG1 346 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CHMP1BQ7LBR1 199 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 R3HCC1LQ7Z5L2 792 aaKnown RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 MARCH3Q86UD3 253 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 GRAMD2AQ8IUY3 354 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 FNDC5Q8NAU1 212 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 OR7A2PQ8NGA2 310 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 OR5M1Q8NGP8 315 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 DUSP19Q8WTR2 217 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 SMPDL3BQ92485 455 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 TUBGCP3Q96CW5 907 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 PPP1R36Q96LQ0 422 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 C3orf30Q96M34 536 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 MS4A4EQ96PG1 132 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 LMF2Q9BU23 707 aaKnown RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 TBL1XR1Q9BZK7 514 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 CALHM2Q9HA72 323 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 SLC24A3Q9HC58 644 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 FAM120CQ9NX05 1096 aaKnown RBP9.47□□□□□ -0.89
CAPN1-225ENST00000533704 ZDHHC2Q9UIJ5 367 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 ABCG2Q9UNQ0 655 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 L3MBTL1Q9Y468 752 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 SNX8Q9Y5X2 465 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 MED13LQ71F56 2210 aa9.47□□□□□ -0.89
CAPN1-225ENST00000533704 MBD3L4A6NDZ8 208 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 MBD3L3A6NE82 208 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 MBD3L5A6NJ08 208 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 B4DXG7 233 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 SCAMP2O15127 329 aaKnown RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 SEC14L5O43304 696 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 EMC8O43402 210 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 TYROBPO43914 113 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 FADS1O60427 444 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 IGKV1D-16P01601 117 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ALOX5P09917 674 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ACP2P11117 423 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 CPN1P15169 458 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 DDX5P17844 614 aaKnown RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 POU3F2P20265 443 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 CTSSP25774 331 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 SERPINB5P36952 375 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 SERPINB4P48594 390 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 LHX2P50458 406 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 GFRA1P56159 465 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 DSCR4P56555 118 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF844Q08AG5 666 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 PDE7AQ13946 482 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 PTGR1Q14914 329 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 PDCD2Q16342 344 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 GRAMD1BQ3KR37 738 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 SPDYE7PQ495Y7 208 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 VPS26BQ4G0F5 336 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 XKR7Q5GH72 579 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 IL23RQ5VWK5 629 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 HOMEZQ8IX15 550 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 GCNT2Q8N0V5 402 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 MREGQ8N565 214 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 COX18Q8N8Q8 333 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 FADS6Q8N9I5 356 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 CDRT4Q8N9R6 151 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 GATSQ8NAP1 163 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ZPLD1Q8TCW7 415 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 INTS12Q96CB8 462 aaKnown RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 MTERF3Q96E29 417 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 C16orf58Q96GQ5 468 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 TM9SF2Q99805 663 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 RTN4RQ9BZR6 473 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ZCCHC3Q9NUD5 404 aaKnown RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF629Q9UEG4 869 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-225ENST00000533704 CSMD1Q96PZ7 3565 aa9.46□□□□□ -0.9
CAPN1-225ENST00000533704 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 A0A1W2PRB8 838 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 TTC36A6NLP5 189 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 SHISA8B8ZZ34 492 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 H3BML4 177 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 SYT5O00445 386 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CFLARO15519 480 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF500O60304 480 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ZIC3O60481 467 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 TBX19O60806 448 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 NKX2-2O95096 273 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 ANGPTL1O95841 491 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 LAMP1P11279 417 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 PEPDP12955 493 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 CHMP24386 653 aa9.45□□□□□ -0.9
CAPN1-225ENST00000533704 OPRM1P35372 400 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms