RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 NME6O75414 186 aaPredicted RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 ERAL1O75616 437 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 TUBBP07437 444 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 CTAGE8P0CG41 777 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 MTHFD2P13995 350 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 STMN1P16949 149 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 EGR1P18146 543 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 USF1P22415 310 aaPredicted RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 KRT20P35900 424 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 EIF1AXP47813 144 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 C21orf58P58505 322 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 MRPS22P82650 360 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 DLG1Q12959 904 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 MORF4L2Q15014 288 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 PPP1R7Q15435 360 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 TSC22D1Q15714 1073 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 ZNF628Q5EBL2 1059 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 SWT1Q5T5J6 900 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 FAM166AQ6J272 317 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 BHLHB9Q6PI77 547 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 C12orf54Q6X4T0 127 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 PAGE2Q7Z2X7 111 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 GALNT10Q86SR1 603 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 CTAGE4Q8IX94 777 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 RFLNBQ8N5W9 214 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 ZNF525Q8N782 197 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 OR4N2Q8NGD1 307 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 OR10D3Q8NH80 312 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 UHMK1Q8TAS1 419 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 TRPC4APQ8TEL6 797 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 FAM168AQ92567 244 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 EFHD2Q96C19 240 aaPredicted RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 ERP27Q96DN0 273 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 CNRIP1Q96F85 164 aaPredicted RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 PBKQ96KB5 322 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 NAP1L3Q99457 506 aaPredicted RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 GPR22Q99680 433 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 RTN4RQ9BZR6 473 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 MANSC1Q9H8J5 431 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 ANKRA2Q9H9E1 313 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 FOLH1BQ9HBA9 442 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 LZTFL1Q9NQ48 299 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 SDHAF3Q9NRP4 125 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 XPR1Q9UBH6 696 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 STOML1Q9UBI4 398 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 PSME2Q9UL46 239 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 MCTS1Q9ULC4 181 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 ABCG2Q9UNQ0 655 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 ACOT9Q9Y305 439 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 RNF11Q9Y3C5 154 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 TGP01266 2768 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 IGLV3-32A0A0A0MS00 114 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 SUPT3HB4E1H0 165 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 SHISA8B8ZZ34 492 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 E7ESA3 106 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 PGRMC1O00264 195 aaKnown RBP6.92□□□□□ -1.3
NXF1-215ENST00000533440 TCF21O43680 179 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 CXCL13O43927 109 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 GUCY1B2O75343 617 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 SUPT3HO75486 399 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 PIAS1O75925 651 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 HNF1AP20823 631 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 PTNP21246 168 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 IL32P24001 234 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 TTKP33981 857 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 PIK3CGP48736 1102 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 MAPK12P53778 367 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 CDH11P55287 796 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 RAB10P61026 200 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 IRF9Q00978 393 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 FASTKD3Q14CZ7 662 aaKnown RBP6.92□□□□□ -1.3
NXF1-215ENST00000533440 P2RY6Q15077 328 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 RAB35Q15286 201 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 CCNYL2Q5T2Q4 361 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 GTF2IRD2BQ6EKJ0 949 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 PPP4R4Q6NUP7 873 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 FAM180BQ6P0A1 224 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 TFAP2EQ6VUC0 442 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 GTF2IRD2Q86UP8 949 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 DEPDC4Q8N2C3 294 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 ZNF619Q8N2I2 560 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 METTL4Q8N3J2 472 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 FBXO36Q8NEA4 188 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 DUSP19Q8WTR2 217 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 TM4SF18Q96CE8 201 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 KLHL29Q96CT2 875 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 MSI2Q96DH6 328 aaKnown RBP6.92□□□□□ -1.3
NXF1-215ENST00000533440 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 MRPL1Q9BYD6 325 aaKnown RBP6.92□□□□□ -1.3
NXF1-215ENST00000533440 POTEKPQ9BYX7 375 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 CHODLQ9H9P2 273 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 NMRAL1Q9HBL8 299 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 CBLN4Q9NTU7 201 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 AHSPQ9NZD4 102 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 ANGPTL3Q9Y5C1 460 aa6.92□□□□□ -1.3
NXF1-215ENST00000533440 ZNF780BQ9Y6R6 833 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms