RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FBXL2Q9UKC9 423 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 ABCG2Q9UNQ0 655 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 SLC6A5Q9Y345 797 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 PCDHGB3Q9Y5G1 929 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 TRPC5OSA6NMA1 111 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 KLF11O14901 512 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 CFLARO15519 480 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 UTS2O95399 124 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 IGKV1D-16P01601 117 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 HMGN2P05204 90 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 HOXD4P09016 255 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 ALOX5P09917 674 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 GABRA1P14867 456 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 GRNP28799 593 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 CCT3P49368 545 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 GABPB1Q06547 395 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 LASP1Q14847 261 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 DUSP5Q16690 384 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 ZNF630Q2M218 657 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 TTMPQ5BVD1 217 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 EXOSC6Q5RKV6 272 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 C1orf185Q5T7R7 199 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 VASNQ6EMK4 673 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 OR5M10Q6IEU7 315 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 OR4F3Q6IEY1 312 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 B3GNT6Q6ZMB0 384 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 ACAD11Q709F0 780 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 WDR75Q8IWA0 830 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 OR56A1Q8NGH5 318 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 SFXN5Q8TD22 340 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 JADE3Q92613 823 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 ZNF75CPQ92670 426 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 TIMP4Q99727 224 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 FAM120CQ9NX05 1096 aaKnown RBP13.99□□□□□ -0.17
CPSF1-210ENST00000532935 PPP4R1LQ9P1A2 415 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 DOCK7Q96N67 2140 aa13.99□□□□□ -0.17
CPSF1-210ENST00000532935 KIAA1549Q9HCM3 1950 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 C17orf51A8MQB3 221 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 B4DXG7 233 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SLCO1B7G3V0H7 640 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 ANKRD28O15084 1053 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 KCNK2O95069 426 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 ALDOCP09972 364 aaKnown RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 GLI4P10075 376 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 BMP7P18075 431 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 EPHA3P29320 983 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SRD5A2P31213 254 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 CLK3P49761 638 aaKnown RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 WNT3P56703 355 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 HBA1P69905 142 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 CBX1P83916 185 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 GRAMD1BQ3KR37 738 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SPDYE7PQ495Y7 208 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SP5Q6BEB4 398 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SPATA19Q7Z5L4 167 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 COX18Q8N8Q8 333 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 OR4K17Q8NGC6 315 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 OR8J2Q8NGG1 315 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 OR14L1PQ8NHC6 308 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 FAM110BQ8TC76 370 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 CA5BP1Q8WTZ4 195 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 ASB5Q8WWX0 329 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 ABTB1Q969K4 478 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 MOAP1Q96BY2 351 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 DTNBP1Q96EV8 351 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 OTUB1Q96FW1 271 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 STACQ99469 402 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 TTYH2Q9BSA4 534 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 RTN4RQ9BZR6 473 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 PRDM14Q9GZV8 571 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-210ENST00000532935 SDHAF3Q9NRP4 125 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 TAS2R10Q9NYW0 307 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 RNF6Q9Y252 685 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 PKDREJQ9NTG1 2253 aa13.98□□□□□ -0.17
CPSF1-210ENST00000532935 DCHS2Q6V1P9 2916 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 GOLGA8QA0A0J9YX86 632 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 GOLGA8OA6NCC3 632 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 AHRRA9YTQ3 701 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 GOLGA8NF8WBI6 632 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
CPSF1-210ENST00000532935 ACTL6AO96019 429 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 CHRNB4P30926 498 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 PTGER4P35408 488 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 GCKP35557 465 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 SOAT1P35610 550 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 CLNS1AP54105 237 aaKnown RBP13.97□□□□□ -0.17
CPSF1-210ENST00000532935 STX5Q13190 355 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.97□□□□□ -0.17
CPSF1-210ENST00000532935 DCST1Q5T197 706 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 CDC73Q6P1J9 531 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 FIGNL1Q6PIW4 674 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 GALNT10Q86SR1 603 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 MARCH3Q86UD3 253 aa13.97□□□□□ -0.17
CPSF1-210ENST00000532935 CCDC71Q8IV32 467 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-210ENST00000532935 PM20D2Q8IYS1 436 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms