RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 OR8D4Q8NGM9 314 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SMARCD2Q92925 531 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 RFKQ969G6 155 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF624Q9P2J8 865 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 CDH10Q9Y6N8 788 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 GSAPA4D1B5 854 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 CHST10O43529 356 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 OR1F1O43749 312 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 GNSP15586 552 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 PTNP21246 168 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ATP12AP54707 1039 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 EFNB1P98172 346 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 NUDT13Q86X67 352 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 FAM129CQ86XR2 697 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ABCG5Q9H222 651 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
CAPN1-208ENST00000527323 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-208ENST00000527323 CACNB4O00305 520 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-208ENST00000527323 PAHP00439 452 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ACP5P13686 325 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 PKLRP30613 574 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 MMP12P39900 470 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 EPHA5P54756 1037 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 TFF2Q03403 129 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 GPR176Q14439 515 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 FCN2Q15485 313 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ESCO2Q56NI9 601 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 SDE2Q6IQ49 451 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 IL20RBQ6UXL0 311 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 AMER3Q8N944 861 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF431Q8TF32 576 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-208ENST00000527323 RGMAQ96B86 450 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 OMA1Q96E52 524 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 FCRL4Q96PJ5 515 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 MS4A8Q9BY19 250 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 ZDHHC5Q9C0B5 715 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 BTBD1Q9H0C5 482 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 GLIPR2Q9H4G4 154 aa11.72□□□□□ -0.53
CAPN1-208ENST00000527323 BTN3A3O00478 584 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 SLC19A2O60779 497 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PRKRAO75569 313 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 DHFRP00374 187 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 CHRM4P08173 479 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 HNRNPA1P09651 372 aaKnown RBP eCLIP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 FAM157BP0CG42 384 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 KELP23276 732 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PSMB5P28074 263 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 LCTLQ6UWM7 567 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 CLIP3Q96DZ5 547 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 TBX5Q99593 518 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 RNF32Q9H0A6 362 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 EQTNQ9NQ60 294 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 DIABLOQ9NR28 239 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 ENAMQ9NRM1 1142 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 TNFRSF10DQ9UBN6 386 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 MOSPD1Q9UJG1 213 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 SPEF1Q9Y4P9 236 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 CSNK1G3Q9Y6M4 447 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 SGK494L7N484 410 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 DVL2O14641 736 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PPM1DO15297 605 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 TBX6O95947 436 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 SSR2P43308 183 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 KHKP50053 298 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 AGFG1P52594 562 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF311Q5JNZ3 666 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 BBS10Q8TAM1 723 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PIGXQ8TBF5 258 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 TFGQ92734 400 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 CREB3L1Q96BA8 519 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 MAP6Q96JE9 813 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 DPH7Q9BTV6 452 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 DDX31Q9H8H2 851 aaKnown RBP11.71□□□□□ -0.53
CAPN1-208ENST00000527323 FOLH1BQ9HBA9 442 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 PHF11Q9UIL8 331 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.53
CAPN1-208ENST00000527323 HRO43593 1189 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 RFPL3O75679 317 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 PTBP1P26599 531 aaKnown RBP eCLIP11.71□□□□□ -0.544e-7■■□□□ 12.9
CAPN1-208ENST00000527323 TRIM23P36406 574 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 TSPAN31Q12999 210 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 TRAM2Q15035 370 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 ANGPT1Q15389 498 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 RAB30Q15771 203 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 RNASE12Q5GAN4 147 aaKnown RBP11.71□□□□□ -0.54
CAPN1-208ENST00000527323 PIP5KL1Q5T9C9 394 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 FAM83HQ6ZRV2 1179 aaPredicted RBP11.71□□□□□ -0.54
CAPN1-208ENST00000527323 YAF2Q8IY57 180 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms