RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PRAMEF25A6NGN4 478 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ANGPT2O15123 496 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 HS6ST1O60243 411 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 FADS1O60427 444 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ICOSLGO75144 302 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 GLSO94925 669 aaPredicted RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 UTS2O95399 124 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 AGR2O95994 175 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 AK1P00568 194 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 OR12D1P0DN82 309 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ZNF24P17028 368 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MST1P26927 711 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 RFC3P40938 356 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MAGEA8P43361 318 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 KHKP50053 298 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MVDP53602 400 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 KCNJ2P63252 427 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 HYAL4Q2M3T9 481 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ARHGAP11BQ3KRB8 267 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 COX20Q5RI15 118 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 DCST2Q5T1A1 773 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 CCNJQ5T5M9 372 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 HEPHL1Q6MZM0 1159 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ANGPTL8Q6UXH0 198 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 DLEU7Q6UYE1 221 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 GALNT10Q86SR1 603 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MTDHQ86UE4 582 aaKnown RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 RETREG3Q86VR2 466 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 SIAH3Q8IW03 269 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MSRB3Q8IXL7 192 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 FITM2Q8N6M3 262 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 CHDHQ8NE62 594 aaPredicted RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 XAGE5Q8WWM1 108 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 RAB8BQ92930 207 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 MIB2Q96AX9 1013 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 AURKBQ96GD4 344 aaPredicted RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 SDF2Q99470 211 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 SLX1AQ9BQ83 275 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 IL1RL2Q9HB29 575 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ZFP64Q9NPA5 681 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 EXD2Q9NVH0 621 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 KLRF1Q9NZS2 232 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 FLRT3Q9NZU0 649 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 VAPAQ9P0L0 249 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 ARMCX1Q9P291 453 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 BOKQ9UMX3 212 aaPredicted RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 GMEB1Q9Y692 573 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 HELZ2Q9BYK8 2649 aaKnown RBP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 LRRC3CA6NJW4 275 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 CLIC1O00299 241 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 HMGN4O00479 90 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 FBP2O00757 339 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 ADAM10O14672 748 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 DCTN3O75935 186 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 WISP2O76076 250 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 UNC5CO95185 931 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 NGFRP08138 427 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 EVI2BP34910 448 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 ANXA11P50995 505 aaKnown RBP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 GAS1P54826 345 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 PPIAP62937 165 aaKnown RBP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 PLGLB1Q02325 96 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 MAPRE2Q15555 327 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 GRAMD1BQ3KR37 738 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 ATAD3BQ5T9A4 648 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 AP1ARQ63HQ0 302 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 OR52N2Q8NGI0 321 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 OR4C3Q8NH37 302 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 PNPT1Q8TCS8 783 aaKnown RBP11.83□□□□□ -0.52
SMPD1-202ENST00000526280 TMEM41AQ96HV5 264 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 CCDC106Q9BWC9 280 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 OSBPL11Q9BXB4 747 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 TTTY12Q9BZ98 90 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 MYLK2Q9H1R3 596 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 GALNT9Q9HCQ5 603 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 ABCG2Q9UNQ0 655 aa11.83□□□□□ -0.52
SMPD1-202ENST00000526280 GCN1Q92616 2671 aaKnown RBP11.82□□□□□ -0.52
SMPD1-202ENST00000526280 LOC100653049A0A140TA62 436 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 CFAP73A6NFT4 308 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 TFECO14948 347 aaPredicted RBP11.82□□□□□ -0.52
SMPD1-202ENST00000526280 KRT34O76011 436 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 GUSBP08236 651 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 RFPL3SP0C7P2 107 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 ATP6V1C1P21283 382 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 TBXA2RP21731 343 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 TDGF1P3P51864 188 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 NCALDP61601 193 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 FOXK1P85037 733 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 COQ5Q5HYK3 327 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 FBXW10Q5XX13 1052 aa11.82□□□□□ -0.52
SMPD1-202ENST00000526280 TIGD3Q6B0B8 471 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms