RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 HDDC3Q8N4P3 179 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 CAMKK1Q8N5S9 505 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ZFP41Q8N8Y5 198 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ASCC1Q8N9N2 400 aaKnown RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 ATP6V1C2Q8NEY4 427 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 OR4F15Q8NGB8 312 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 FANK1Q8TC84 345 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 NT5CQ8TCD5 201 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 BRIX1Q8TDN6 353 aaKnown RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 GANCQ8TET4 914 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 KLK6Q92876 244 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RNF31Q96EP0 1072 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SLC41A3Q96GZ6 507 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 C10orf90Q96M02 699 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ATF6BQ99941 703 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SOSTQ9BQB4 213 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RNF32Q9H0A6 362 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 MMP28Q9H239 520 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SYNPO2LQ9H987 977 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SFXN1Q9H9B4 322 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TRPV4Q9HBA0 871 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ZDHHC4Q9NPG8 344 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 IL20Q9NYY1 176 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 NTMQ9P121 344 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SERGEFQ9UGK8 458 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 NDRG2Q9UN36 371 aaKnown RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 ZFR2Q9UPR6 939 aaKnown RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 STON1Q9Y6Q2 735 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 CEP350Q5VT06 3117 aa8.34□□□□□ -1.08
PKP3-202ENST00000524646 A0A1W2PP55 124 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 DUXAA6NLW8 204 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 OR52A4PA6NMU1 304 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CENPXA8MT69 81 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 SGK494L7N484 410 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 PLA2G10O15496 165 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 LRRTM2O43300 516 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 LATO43561 262 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 HPGDSO60760 199 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 NTN1O95631 604 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CEACAM5P06731 702 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 YES1P07947 543 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CHRM5P08912 532 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 PRKAR1AP10644 381 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 NDUFV2P19404 249 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 RPS4Y1P22090 263 aaKnown RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 HLA-DMAP28067 261 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 GJA4P35212 333 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 MTNR1BP49286 362 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ERVK-21P61565 698 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 RPS15AP62244 130 aaKnown RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 DAB2P98082 770 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 EOGTQ5NDL2 527 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 VASNQ6EMK4 673 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ZNF322Q6U7Q0 402 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 VITQ6UXI7 678 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 MTSS1LQ765P7 747 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 GET4Q7L5D6 327 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 CXXC5Q7LFL8 322 aaKnown RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 VN1R4Q7Z5H5 301 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ASPGQ86U10 573 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 RANBP3LQ86VV4 465 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 NKAIN4Q8IVV8 208 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 TCTE3Q8IZS6 198 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 SIRT6Q8N6T7 355 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 C12orf76Q8N812 135 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 BBS1Q8NFJ9 593 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 OR2T33Q8NG76 320 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 OR7G2Q8NG99 324 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 NEIL3Q8TAT5 605 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ADAMTS15Q8TE58 950 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 DNAJA4Q8WW22 397 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 SPRYD4Q8WW59 207 aaPredicted RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 KAT2AQ92830 837 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CDS1Q92903 461 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 RIPOR3Q96MK2 946 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 FRMD6Q96NE9 622 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 OR2M4Q96R27 311 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 GDF15Q99988 308 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 MACROD1Q9BQ69 325 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 C1QTNF7Q9BXJ2 289 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 FN3KQ9H479 309 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 RERGLQ9H628 205 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 PPP1R3EQ9H7J1 279 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 HINT3Q9NQE9 182 aaKnown RBP8.33□□□□□ -1.08
PKP3-202ENST00000524646 PRDM9Q9NQV7 894 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 SPHK1Q9NYA1 384 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms